Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1966 ATGCAGAAGCCACCAAATTCTCATGAGTTTGCCCTTAAGGAGACAACGCCGAACATTGGAGCAGGGGCAGTCACAAGGGACAAGCTATCCTGCACCTATGACTTGGTCGAGCAAATGCAATACCTCTACGTTCGTGTCGTCAAAGCCAAAGAATTACCTACAAAAGATGTCACTGGTAGTCTTGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGAATTACGAAGCATTTTGAGAAGAAGTCAAATCCCCAGTGGAATCAGGTTTTCGCCTTCTCCAAAGATCGGATCCAGGCTTCGGTTTTGGAGGTGATTGTTAAAGATAAAGATGTTATAGCAGATGACTTTGTAGGGAGGGTGTGGTTTGATCTGAATGATATACCGAAACGTATACCACCAGATAGCCCTTTGGCTCCGCAATGGTATAGGCTCGAAGATCGCAAAGGTGAGAAAGTCAAGGGAGAGTTAATGCTTGCAGTTTGGATGGGAACTCAAGCAGATGAGGCATTTCCTGACTCTTGGCATTCTGATGCAGCAATGGTTGGATCTGAAGCAGTTGCAAATATAAGATCAAAAGTTTACTTGTCTCCCAAGCTTTGGTATGTTAGGGTCAATGTAATCGAAGCTCAGGACTTGATTCCAAGTGATAAAAGCCGGTATCCTGAAGTTTTTGTGAAGGTTGCTCTAGGGAATCAGTTTTCAAGAACTAGAATATCTCAACTGAAGACCATAAATCCTATATGGAATGAAGATTTGATGTTTGTCGCAGCCGAGCCATTCGAGGAACCTTTGGTTTTAACCGTGGAAGACAGGGTTGGACAGAACAAAGATGAAACCCTAGGAAAGTGTATGATTCCTTTGCAGATGGTGCAAAGGCGGTTAGACCATAAGCCGGTGAACACTCGGTGGCATAATCTTGAGAAGCACTTGGTTGTTGAAGGTGAAAAAAAGGACACGAAATTTGCAAGCAGGATACATTTAAGGTTATGTTTGGATGGAGGATACCACGTGCTGGACGAGTCAACGCATCACAGTAGTGATCTTAGGCCAACGGCGAAGCAGCTATGGAAGTCAAGTATTGGTATTCTAGAAGTAGGGATTATAAGTGCACATGGGTTGATGCCGATGAAAACTAGAGATGGTAGAGGAACCACAGATGCTTATTGCGTAGCGAAATTCGGACAGAAGTGGATCCGAACTAGGACAATCGTCGATAGCTTTAGTCCAAAGTGGAATGAACAATACACTTGGGAAGTATTTGATCCATCTACTGTTATCACAATAGGTGTCTTTGATAACAATCATTTACATGGAGGAGACAAATCAAAGGATTCTAGGATAGGGAAGGTAAGAATTCGGTTATCTACTCTTGAAACCGATAGAGTTTACACACATTCATATCCTCTTTTAGTATTAAATCCGTCAGGAGTGAAGAAAACAGGAGAAGTTCAATTGGCTGTCAGGTTCACAAATTCTTCTTACTTCAACATGTTGTATATGTATTCCATGCCGCTGTTGCCGAAGATGCACTACATTCATCCCTTATCGGTGATTCAGCTCGACCATCTGAGGCATCAAGCGACACAAATTGTGTCGATGAGGCTGAGCCGAGCTGAGCCACCGCTAAGGAAAGAAGTAGTAGAATACATGCTTGATGTGGATTCACATATGTGGAGTATGAGAAGAAGCAAAGCCAATTTCTTCAGGATAATGAAAGTTTTATCGAGTTTGATCGCATTTGGAAAATGGTTTGATCAAATTTGCAATTGGAAAAACCCGATCACATCGATACTAATTCATATCCTATTCATAATATTAGTTCTTTACCCTGAACTAATACTTCCAACAATTTTCCTATACATGTTCATGATTGGAATATGGAACTTTAGATGGAGGCCAAGACACCCTCCACATATGGACACTAGACTATCTCATGCCGACGCAGCTTTTCCGAATGAACTAGACGAAGAGTTCGACACATTCCCTACATCGCGTTCCTCAGATATTGTTCGAATGAGATACGACCGATTAAGAAGCATTGGAGGGAGAGTTCAAAGTGTTGTAGGTGATCTTGCAACTCAAGGAGAAAGGTTTCAAAGTCTTTTAAGTTGGAGAGATCCAAGGGCTACAACACTTTTTGTAACATTTTGTTTTGTTGCTGCTATGATTCTTTATGTTACTCCTTTTCAAGTTGTGTTACTAATTACTGGCTTTTATGTTCTGAGACATCCTAGATTCAGACAGAAACTTCCATCAGTTCCTCTTAATTTCTTTAGGAGGTTACCTGCTAGATCAGATAGCATGTTATAG 2313 0.415 MQKPPNSHEFALKETTPNIGAGAVTRDKLSCTYDLVEQMQYLYVRVVKAKELPTKDVTGSLDPYVEVKLGNYKGITKHFEKKSNPQWNQVFAFSKDRIQASVLEVIVKDKDVIADDFVGRVWFDLNDIPKRIPPDSPLAPQWYRLEDRKGEKVKGELMLAVWMGTQADEAFPDSWHSDAAMVGSEAVANIRSKVYLSPKLWYVRVNVIEAQDLIPSDKSRYPEVFVKVALGNQFSRTRISQLKTINPIWNEDLMFVAAEPFEEPLVLTVEDRVGQNKDETLGKCMIPLQMVQRRLDHKPVNTRWHNLEKHLVVEGEKKDTKFASRIHLRLCLDGGYHVLDESTHHSSDLRPTAKQLWKSSIGILEVGIISAHGLMPMKTRDGRGTTDAYCVAKFGQKWIRTRTIVDSFSPKWNEQYTWEVFDPSTVITIGVFDNNHLHGGDKSKDSRIGKVRIRLSTLETDRVYTHSYPLLVLNPSGVKKTGEVQLAVRFTNSSYFNMLYMYSMPLLPKMHYIHPLSVIQLDHLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLSSLIAFGKWFDQICNWKNPITSILIHILFIILVLYPELILPTIFLYMFMIGIWNFRWRPRHPPHMDTRLSHADAAFPNELDEEFDTFPTSRSSDIVRMRYDRLRSIGGRVQSVVGDLATQGERFQSLLSWRDPRATTLFVTFCFVAAMILYVTPFQVVLLITGFYVLRHPRFRQKLPSVPLNFFRRLPARSDSML* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1966 770 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 6 770 - -
Mtr4g1966 770 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Mtr4g1966 770 CDD C2B_MCTP_PRT_plant 41 165 - -
Mtr4g1966 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 179 IPR035892 -
Mtr4g1966 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 362 496 IPR035892 -
Mtr4g1966 770 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 770 - -
Mtr4g1966 770 SMART C2_3c 363 467 IPR000008 -
Mtr4g1966 770 SMART C2_3c 202 300 IPR000008 -
Mtr4g1966 770 SMART C2_3c 41 137 IPR000008 -
Mtr4g1966 770 Gene3D C2 domain 186 332 IPR035892 -
Mtr4g1966 770 CDD C2C_MCTP_PRT_plant 202 351 - -
Mtr4g1966 770 Gene3D C2 domain 40 162 IPR035892 -
Mtr4g1966 770 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 353 IPR035892 -
Mtr4g1966 770 Pfam Plant phosphoribosyltransferase C-terminal 615 770 IPR013583 -
Mtr4g1966 770 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Mtr4g1966 770 Pfam C2 domain 201 307 IPR000008 -
Mtr4g1966 770 Pfam C2 domain 362 470 IPR000008 -
Mtr4g1966 770 Pfam C2 domain 41 135 IPR000008 -
Mtr4g1966 770 Gene3D C2 domain 339 491 IPR035892 -
Mtr4g1966 770 CDD C2D_MCTP_PRT_plant 363 487 - -
Mtr4g1966 770 ProSiteProfiles C2 domain profile. 345 468 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1966 Mtr-Chr4 33087253 33090800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1966 1 770 Lipid Metabolism Gene Families AT3G57880 81.266 0.0 1345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1966 - - gmx:100788273 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1966 4 33087253 33090800 Mtr4g1966 4 33087253 33090800 ECH