Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1961 ATGTCAAAAACCACCTCATCCATCAGCGACTCTCTCGAAACACCAACACTCGATGCAGAATCTCCCACACTCCTCCACTCCATCTCATCCTACGGAGGCTACGCCTACGTTCGTATGTCCTCCCTCGCTGCCGCCGGCGACATTCGCGCAGCAGAAGCAGTTCGCGAGATGGCGTGGGAGCAGCTGCACTCTGGTCCGTGGCACTCGGTGTTGCCGGTGTGGCGTGACGCGTACTCGATGGCCTGTTTGCAAGTTGCGAAGTGTTGCTATGAAAATGGAGAGTTTAAGGAAGCACTTAGGGCTTTGGATATGGGGATTATTATGGGTGGGAGTTTGCTTAGGAAGGATTTGGATTCTTCTGTTGTGAAGGTTTCGGAGAAAGCGAGGTTGGTTAAGGTTGATGATGGAAGGTGTAAAGATTTTGGTGGCTCTGAGAATCGACTCGTTGATCTTGAATTTGATGTTTCAAAGGTGCTCCAACTTTTGCCTGTTAAGTCCCTTGCTTCAAAGCTTGTAGTGAAGAGATCTGCCTTGTCACTGGAGAACTTCCTGAAAGATCATTACCTGGCTGGCTCTCCAGTTATCATCAGCGACTGCATGGCGCACTGGCCAGCCAAGAAAAACTGGAATAATATAGATTACTTGCTAAGAGTTGCTGGTGACCGCACTGTTCCGGTTGAGGTTGGGAAAAACTATTTATGTGCAGATTGGAAGCAAGAGCTAGTTACATTTTCAGAGTTCCTTGATCGGATAAGATCTAATGGCTGTTCACCTGGCGGTCCTACATATCTTGCTCAGCATCCCTTGTTTGATCAGATAAATGAGCTTCGGAGAGATATCTTTATTCCTGACTATTGTTTTACTGGTGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACACCATTACACCATGATCCGCATCATAACATACTAGCACAGGTTGTTGGGAAAAAATACGTTAGGCTTTATCCAGCATCTTTGTCTGAGGAACTTTTCCCCTACTCAGAAACCATGCTTTGCAATTCCAGCCAGGTTGATTTAGATGACGTTGATGAGATGAAGTTTCCTAAGGTGCAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGAAATGTTATATATCCCGCCAAAGTGGTGGCACTATGTGCGGTCTTTAACTACCAGTTTATCAGTTAGCTTTTGGTGGAGTGACGGTGAAAGTTCATCTCCGTCTTAA 1242 0.4614 MSKTTSSISDSLETPTLDAESPTLLHSISSYGGYAYVRMSSLAAAGDIRAAEAVREMAWEQLHSGPWHSVLPVWRDAYSMACLQVAKCCYENGEFKEALRALDMGIIMGGSLLRKDLDSSVVKVSEKARLVKVDDGRCKDFGGSENRLVDLEFDVSKVLQLLPVKSLASKLVVKRSALSLENFLKDHYLAGSPVIISDCMAHWPAKKNWNNIDYLLRVAGDRTVPVEVGKNYLCADWKQELVTFSEFLDRIRSNGCSPGGPTYLAQHPLFDQINELRRDIFIPDYCFTGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYPASLSEELFPYSETMLCNSSQVDLDDVDEMKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSDGESSSPS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1961 413 Pfam Cupin-like domain 182 406 IPR041667 -
Mtr4g1961 413 SUPERFAMILY Clavaminate synthase-like 176 405 - -
Mtr4g1961 413 ProSiteProfiles JmjC domain profile. 256 413 IPR003347 -
Mtr4g1961 413 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 32 406 - -
Mtr4g1961 413 PANTHER - 32 406 - -
Mtr4g1961 413 SMART cupin_9 262 410 IPR003347 -
Mtr4g1961 413 Gene3D Cupin 171 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1961 166 404 Acyl Lipid Metabolism Gene Families AT3G45880 25.000 2.48e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1961 K24444 - gmx:100813075 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1961 4 33015849 33023380 Mtr4g1961 4 33015849 33023380 ECH