Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1960 ATGGCTTCAACAAATACTTCAACACAAGTTTTCAAAGACAACAACAATGGAAACTCAGAAACTACAAGACAGGAAATTAAGGTTGCTATAGCCAAAGCAGTGGAACTAAGAGCTCTTCATGCTGCTTTAATGCGAGGAAATAGCTCAACCAATGCAAAGTTTCTATCTCCTTCCCCTGTTTCACGCTCTGTTTCTCAGTTCTCTGCTCATGATTACCCTGTTTTCACACCTAGCTATGAAGATGACCCAATTATGGGATACAACCAAAACCACACGAAATGCCTAACAATATCAGAAAGTTGGGATGAAGGAGAATCAGGAAACAGCATAGAAACCAGTGTACAAGATTACAGGGATAAACCAAGTTCAAGAAAAGGGGTACTACTACCTTGTGGTTTTACCAACCTAGAATCTCACATATGTCCTGTTGATGACACCAAATCCGTAACCGGTTCTTGTGCAAATCATATAACTGTTCTTCAAACATCGCCTACGAACGAAAGCTACAGGTGTAAGAGAAGAAACAGTTTAGAGGATTCTAAATCAGTATCCTCCTGCAATAAATGTAACCCTGCAATTATAACTAGTGAACTGGAGAGTGCAAGGAACAGCAAGAGCTCCAATATTGTTGTTCCTGCCACAGATTCCCACTCGTCGTTTCAGTCTGAAACAAAAAGCAAAGGGGTGATTTCGTGGTTGTTTCCTCGGTTAAAGAAGAAGCATAAGAATGAGAATTCTCCTAATAGAGCAGAATCTGAGGATGTTTCTCAGGTTCTCAAGGACATAGGAATAATGTCAATTGAGGCATTGAAGAAAGAGTTGATAGAAGCGAACGAGAATAGAGATGTGGCGTTGATGGAAGTTTCTGAGATGCGATGTTCATTGGGAGAGTTGAGACAGAAGATGGAGTACTTGGAGAATTACTGTGAAGAGCTGAAGAAAGCTTTGAAGCAATCCATGCAGACACAGGCAAGGGATTCTCAACTTTGTGAACAGATTAAGCTTAGTAATCTTCCTCAGAGAGGGAAATCAATTGACGGAAATGATGAAAATTCAATGCCTGTGAACGAGGAAGTAATGATAGAGGGATTCTTGCAGATAGTATCGGAGTCAAGATTATCAGTGAAGCAGTTCTGTAAGAACCTTATAAACAACATTGAAGAAACTGATCACTCATTGATAGAAAATTTGAACTCGCTTCTTCAACCGTATAAGCTGTCTCTAAATTCCAAGTACTCAAAGGCAGTTCTGTATCATTTTGAAGCTTTCATAAATCAGGCTCTCTACCAAGACTTTGAGAATTGCATTTTTCAAACGAACGGATGCTCAAAATTCATAGACCGTCATGAAGACCGCCAAGCGAAATTCTCGTCATTCGTTGCTCTTAGGAATTTGAGCTGGAATGAAGTACTGAGAAAGGGAACAAAATATTACAGTGAAGAGTTTAGCAAGTTTTGTGATCAGAAAATGAGTTGTATTACCAGTACTCTAAATTGGATTAGGCCTTGGCCTGAACAGCTCCTTCAAGCTTTCTTTGTGGCTGCAAAATGCATGTGGTTGCTACATTTGCTTGCATTTTCTTTCAACCCACCACTGGGAGTTTTAAGGGTCGAAGAGAATAGAACCTTTGATCATCGCTATATGGAAGATATGAGTCCAAGGTCACAGGGTCCAAGCAAAGTTAAGATCATGGTTAATCCAGGGTTTTATGTTAAAGATAGGGTATTAAGGTGTAAGGTCCTTTGCAGGTACAAATCCACAGCCTAA 1767 0.399 MASTNTSTQVFKDNNNGNSETTRQEIKVAIAKAVELRALHAALMRGNSSTNAKFLSPSPVSRSVSQFSAHDYPVFTPSYEDDPIMGYNQNHTKCLTISESWDEGESGNSIETSVQDYRDKPSSRKGVLLPCGFTNLESHICPVDDTKSVTGSCANHITVLQTSPTNESYRCKRRNSLEDSKSVSSCNKCNPAIITSELESARNSKSSNIVVPATDSHSSFQSETKSKGVISWLFPRLKKKHKNENSPNRAESEDVSQVLKDIGIMSIEALKKELIEANENRDVALMEVSEMRCSLGELRQKMEYLENYCEELKKALKQSMQTQARDSQLCEQIKLSNLPQRGKSIDGNDENSMPVNEEVMIEGFLQIVSESRLSVKQFCKNLINNIEETDHSLIENLNSLLQPYKLSLNSKYSKAVLYHFEAFINQALYQDFENCIFQTNGCSKFIDRHEDRQAKFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCITSTLNWIRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGVLRVEENRTFDHRYMEDMSPRSQGPSKVKIMVNPGFYVKDRVLRCKVLCRYKSTA* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1960 588 Coils Coil 267 287 - -
Mtr4g1960 588 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g1960 588 PANTHER - 1 588 - -
Mtr4g1960 588 Coils Coil 295 325 - -
Mtr4g1960 588 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 1 588 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1960 Mtr-Chr4 33012789 33015521 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1960 - - gmx:100814681 940.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1960 4 33012789 33015521 Mtr4g1960 4 33012789 33015521 ECH
Mtr2g3411 2 48179726 48182392 Mtr4g1960 4 33012789 33015521 PCT