Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1959 ATGGATAAATATTTGGTTCCTAAAAAGCATTTGAAAGAAAGGGTTAAGCTTCTTCATAGGTTTCGTTGGAAGAGAAGTTTAGTTGAACTGAATGGGAAATTTGAGCCGAATTTTCGACATGAAATGATGAACTTGCTTATGGGTTCTTATTCTGAGGTTGGAGTGTTCCCACACTTGTATCAAATGGAAATCGACGCGCCTTGCAACTCTAATATTAATCGAATTCTTAGTGAGGCAAGTGGTGAACGCCTTCTTCCATTAAGAAGAAGGAAAGGTGTATCTTCTGTAGACTTTGACAACAAGGGAATATACTTGGCATCTGTCACAAAATCAGGTTGCTTAACGGTTCATGACTTCGAAGCTCTTTATTGCAAAACAAACAAATTAAAATGCTTGCCAGAAGACGAAAGCAAACTTTTACTGCATCTCTCACCCGATTCACAACTTGATGTTGTCAAATGGAATCCTCTTAACCAGAATGAGGTTCTTTGTGGCTCTTTGAAACGTAATGCACTACTCATATTTGATGTTACATATATGATGTCAGAACCAATTGAAGAGTTACGTACAAGAACTACCACCACAGTTAATGGATCGAACATTCCTAAAGGTCTATCTGATGTTGCTTTTGCATCGGATGACTCAAGGATATTTGGTTCTGACACGCATGGTACGATTAATGTTTGGGATAGAAGAGTAAAGAGCCTGCCTTGCCTCGAACTAACATCTGCTTCATTTGGTACCCTTAACAGCGTCCAATTAGATGCAGAAAACCAGATTATTTATGGTGCTGGGAGGCATGGGATCGTGTATGTGTGGGATATTCGTGGTGGAAGAGCATCTACTGCATTCCTAAGTCACAAAGAGACATGCCATCCACCTGTAACATCAGTGAAGTTGGCAACGTTACTTGAGAAGATTGGATCCTTAAAGGCACAAACAGAAATTGTTCCCAAGGAGATTCAATCTATTGGCCTTAATCCATCGTGTCCATATCAGTTAGCATTCCATCTAGAAGATGGCTGGTCGGGCATTTTGGATATTAATAAGTTTGAAGTTACACATATTCACTGCCCACCCCCAGCTTGGTTAAATGATTCCTATGCTTCTCTCGATCAAATGGATTTAAGAAAACCTTCATGGTTATCGACATGTTCGGTCTATTTGGCAGGGTCACCATTTGATCGTGGCCTTCATATGTTAGATTTTTACCCGAGTATCAACTCACCGAGTCACGTGGATTACAAGGAGGATATACAAGAACTTTCCAATCCAACCAAACAAAAGAATCAAAATAGATTCATTCATTTACCCGAAGAAGTTTTGTCATGTGCTGCTCATCCTTTGTACAATGCCATTGTAGCGGGAACAAAGGAAACATCTTTGCTTGTGATTTCCCAAAAACGTAAGTCATGCAAAGAAGAAGATTAG 1431 0.3969 MDKYLVPKKHLKERVKLLHRFRWKRSLVELNGKFEPNFRHEMMNLLMGSYSEVGVFPHLYQMEIDAPCNSNINRILSEASGERLLPLRRRKGVSSVDFDNKGIYLASVTKSGCLTVHDFEALYCKTNKLKCLPEDESKLLLHLSPDSQLDVVKWNPLNQNEVLCGSLKRNALLIFDVTYMMSEPIEELRTRTTTTVNGSNIPKGLSDVAFASDDSRIFGSDTHGTINVWDRRVKSLPCLELTSASFGTLNSVQLDAENQIIYGAGRHGIVYVWDIRGGRASTAFLSHKETCHPPVTSVKLATLLEKIGSLKAQTEIVPKEIQSIGLNPSCPYQLAFHLEDGWSGILDINKFEVTHIHCPPPAWLNDSYASLDQMDLRKPSWLSTCSVYLAGSPFDRGLHMLDFYPSINSPSHVDYKEDIQELSNPTKQKNQNRFIHLPEEVLSCAAHPLYNAIVAGTKETSLLVISQKRKSCKEED* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1959 476 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 475 - -
Mtr4g1959 476 SUPERFAMILY WD40 repeat-like 90 466 IPR036322 GO:0005515
Mtr4g1959 476 Gene3D - 72 306 IPR015943 GO:0005515
Mtr4g1959 476 PANTHER WD40 REPEAT PROTEIN 12, 37 1 475 - -
Mtr4g1959 476 SMART WD40_4 136 176 IPR001680 GO:0005515
Mtr4g1959 476 SMART WD40_4 189 230 IPR001680 GO:0005515
Mtr4g1959 476 SMART WD40_4 80 118 IPR001680 GO:0005515
Mtr4g1959 476 SMART WD40_4 234 274 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1959 - - cam:101498313 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1959 4 32998974 33007989 Mtr4g1959 4 32998974 33007989 ECH