Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1954 ATGAAGGTTTTTGTGTTTATGTTTATGGCCATTATGCTGTTTGGTTGTGTTGCTGGCAAAGAATGCATGAACAATCTTCCTCAATCACATACATTTCGGTACGAGCTGTGGGCATCAAAGAATGAAACATGGAAGAAAGAAGTGATGTCTCACTATCATTTGACACCAACTGATGAATCGGCTTGGGCAGATTTGCTTCCAAGGAAGCTTTTATCGGAAGAAAACCAACGTGACTGGGCTGCTAAGTATAGGGAAATGAAGAATGCCGATCTGTCTAAGCCACCAGTTGGATTTCTCAAAGAAGTTCCTCTTGGGGATGTGAGATTGCTTGAAGGTTCTATCCATGCTCAAGCACAGAAGACTAATTTGGAGTATTTGTTAATGTTGGATGTTGATAGCTTGATTTGGAGTTTCAGAAAGACGGCTGGTTTACCGACTCCTGGTACACCGTATGGAGGATGGGAGGATCCTAGCATAGAACTCAGAGGCCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTAATGTGGGCCAGCACAAAGAATGATAACCTGAACGAGAAAATGTCGGCTCTTGTTTCCGGTTTGTCCGCCTGTCAGGAAAAAATTGGAACGGGATATCTGTCTGCTTTTCCAACCGAGCTTTTTGATCGAGTAGAAGCTCTTCAATATGCATGGGCTCCTTATTATACCATTCACAAGATCTTGGCTGGCCTGTTGGATCAATATACAATTGGTGGAAACCCTCAAGCTCTGAAAATGGTTACGTGGATGGTTGATTACTTTTACAACAGAGTCATGAATGTAATACAGAAGCTCACTGTAAATGGACATTATCAATCCCTGAATGAGGAAGCTGGAGGAATGAATGATGTCCTTTACAGATTATATAGCATAACGAGGGATTCAAAGCATCTGGTGTTGGCGCACCTTTTTGACAAGCCTTGCTTTTTAGGGGTGCTTGCAGTACAGGCTAATGACATAGCTAATTTTCATGCCAATACGCATATCCCAATTGTTGTTGGATCTCAATTGCGGTATGAAGTCACAGGTGATCCACTTTATAAGGATATTGGGGCATTCTTTATGGACATTGTAAACTCATCTCACACCTATGCAACAGGAGGAACATCAGTCCGTGAGTTCTGGAATGACCCAAAGAGAATAGCTGACAACTTAAAATCAACAGAGAATGAAGAATCATGCACAACTTACAATATGTTGAAGGTTTCGCGGCACCTGTTTAGATGGACGAAAGAAGTCTCGTACGCAGATTATTATGAACGTGCCTTAACGAATGGTGTACTCAGTATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCTCTAGGTCTTGGTGTTTCCAAAGCTAAAACTGACAAGGGTTGGGGAAATCCATTTAACACTTTCTGGTGCTGCTACGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATATATTTTGAAGAAGAAGGGCATAATCCTAGTCTATACATCATTCAGTATATATCAAGCTCATTTAATTGGAAATCTGGGAAAATTTTGCTCACTCAGACAGTTGTTCCGGCTGCTTCATCGGACCCTTACCTACGAGTGACATTTACCTTTTCTCCTAATGAGACAACTGGGACTTCGTCAACATTGAACTTTCGTGTACCATCTTGGAGTCACGCAGATGGTGCCAAGGCGATATTGAATTCTGAAACTTTATCTCTTCCAGCTCCAGGGAATTTTTTGCCAATCACACGACCGTGGAATGCCGGTGACAATCTGACCCTTCAGTTGCCTCTTACCATCAGAACAGAAGCCGTAAAAGATGACAGACCTGAATTTGCATCACTTCAAGCCATTCTTTACGGACCATATCTTCTCGCCGGTCACACCACCAGCATTTGGGACATTAAAGGCGTTACTAACAAAGCTGTTGCAGACTGGATTACTCCAATTCCATCCAATTACAGTAGTCAACTAGTTTCTTATTCACAAGACATCAACAAATCAACTCTTGTTATAACAAACTCAAAACAATCACTTACGATGGAAATATTACCCGGACCTGGCACTGAAAATGCTCCTCATGCTACCTTTAGACTTATCCCAAAAGACGCTGATGGTAAAACTGTGATGTTAGAACCATTTGATCTTCCTGGAATGACTGTAAGTCACCAAGGACCGGAGAAACCTCTTATCATTGTAGATTCTTCCCATGGGGGGCCTTCATCGGTTTTTCTTGTGGTACCAGGATTGGATGGACGAAATCAAACAATATCTTTAGAATCACAAAGCAATAAAGATTGTTACGTGCATAGCGATATGAGTGCTGGTTCAGGAGTTAAGCTAAGGTGCAAGACTGCTTCTGAAGCTAGTTTTAACCAAGCAACTAGTTTTGTTTCCGGCAAAGGATTAAGGCAATACCATCCTATCAGCTTTGTTGCTAAAGGTGCAAACCAGAATTTTCTTTTAGACCCATTGTTCAACTTTAGGGATGAGCATTATACAGTTTATTTCAATATTCAAGATTGA 2538 0.4141 MKVFVFMFMAIMLFGCVAGKECMNNLPQSHTFRYELWASKNETWKKEVMSHYHLTPTDESAWADLLPRKLLSEENQRDWAAKYREMKNADLSKPPVGFLKEVPLGDVRLLEGSIHAQAQKTNLEYLLMLDVDSLIWSFRKTAGLPTPGTPYGGWEDPSIELRGHFVGHYLSASALMWASTKNDNLNEKMSALVSGLSACQEKIGTGYLSAFPTELFDRVEALQYAWAPYYTIHKILAGLLDQYTIGGNPQALKMVTWMVDYFYNRVMNVIQKLTVNGHYQSLNEEAGGMNDVLYRLYSITRDSKHLVLAHLFDKPCFLGVLAVQANDIANFHANTHIPIVVGSQLRYEVTGDPLYKDIGAFFMDIVNSSHTYATGGTSVREFWNDPKRIADNLKSTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKAKTDKGWGNPFNTFWCCYGTGIESFSKLGDSIYFEEEGHNPSLYIIQYISSSFNWKSGKILLTQTVVPAASSDPYLRVTFTFSPNETTGTSSTLNFRVPSWSHADGAKAILNSETLSLPAPGNFLPITRPWNAGDNLTLQLPLTIRTEAVKDDRPEFASLQAILYGPYLLAGHTTSIWDIKGVTNKAVADWITPIPSNYSSQLVSYSQDINKSTLVITNSKQSLTMEILPGPGTENAPHATFRLIPKDADGKTVMLEPFDLPGMTVSHQGPEKPLIIVDSSHGGPSSVFLVVPGLDGRNQTISLESQSNKDCYVHSDMSAGSGVKLRCKTASEASFNQATSFVSGKGLRQYHPISFVAKGANQNFLLDPLFNFRDEHYTVYFNIQD* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1954 845 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Mtr4g1954 845 PANTHER - 7 844 - -
Mtr4g1954 845 Gene3D - 706 837 - -
Mtr4g1954 845 Pfam Beta-L-arabinofuranosidase, GH127 106 630 IPR012878 -
Mtr4g1954 845 SUPERFAMILY Six-hairpin glycosidases 161 438 IPR008928 GO:0005975
Mtr4g1954 845 PANTHER PROLINE-TRNA LIGASE (DUF1680) 7 844 - -
Mtr4g1954 845 SUPERFAMILY AbfB domain 745 825 IPR036195 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1954 Mtr-Chr4 32864725 32869916 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1954 K09955 - gmx:100781521 1340.1