Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1953 ATGATGGAGGCTTTTGTGTATGTGTTTTTGGCACTTATCTTGTGTGGTTGTGCAAATAGCAAAGAATGCATAAATAATTTGCCTCAATCGCATACGTTGCGAACTGAATTAATGGCATCAAAGAATGAGACATGGAAGAAAGAAGTGATGATGTATCAGTCTCATGTTCATGTGACACCATCCGATGAATCGGCTTGGCAAGAAATGATTCCAAAGGAGATGTTCTTAACACAAGAAAACCAACGTGATTGGGCTGCTAAGTATAGGGAAATGAAGAATGCCGATGTGTCTAAGCCACCTGTTGGATTTCTCAAAGAAGTTCCACTTGGGGATGTGAGGTTGCTTGAAGGTTCTATCCATGCTCAAGCACAGAAGACTAATTTGGAGTATTTGTTGATGTTAGATGTTGATAGGTTGATTTGGAGTTTCAGGAAGATGGCTGGTTTACCGACTCCTGGTGCACCTTATGGTGGATGGGAGAAACCAGATCAGGAACTCAGAGGACATTTTGTTGGGCATTACTTAAGTGCAACAGCTCAAATGTGGGCCAGCACAAACAACAATATCGTGAAGGATAAAATGTCGGCTCTTGTTTCCGGTCTGTCCGCCTGTCAGGAAAAAATTGGAACGGGATATCTGTCTGCATTTCCAACCGAGTTTTTTGATCGAATTGAAAATCTTGAATATGCATGGGCTCCATATTACACCATTCACAAGATCTTGGCTGGCCTTTTGGATCAATATACAATAGCTGGAAACCCTCAAGGTCTGAAAATGGTTACATGGATGGTCGATTACTTTTACAACAGAGTGATGAATGTAATACAAAAGTTCACTGTAAATAGACACTATCAATCCCTGAATGAGGAAGCTGGAGGAATGAATGATCTCCTTTACAGATTATATAGCTTAACGAGGGATCCAAAGCATCTGGAGTTGGCGCACCTTTTTGACAAGCCGTGCTTTTTAGGGGTGCTTGCAGTACAGGGTAATGACATAGCTGATTTTCACGCTAATACACATATCCCAATTGTTGTTGGAGCCCAATTGCGGTATGAACTCACAGGTGATTTACATTATAAGGATATTGGGCAATACTTTATGGACATTGTAAACTCTTCTCACGCCTATGCAACAGGAGGAACATCAGTCGGCGAGTTCTGGAGAAATCCAAAGAGAATAGCTGACAACCTAAAATCAGCAGAGACCGAAGAATCTTGCTCAACTTACAATATGTTGAAGGTTTCGCGGCACCTGTTCAGATGGACCAAAGAAGTCACTTACGCAGATTATTATGAGCGTGCCTTAACGAATGGTGTACTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCTCTCGGCCTTGGTGTTTCCAAAGCACAAACGTATTGGAAATGGGGAACGCCATTTGATTCTTTCTGGTGCTGCTATGGAACAGGAATTGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAAGAAGGGAAACATCGTAGTCTATACATCATTCAGTACATATCAAGCTCATTTAATTGGAATTCTGGAACTGTCAATAAAAAAAATCATAATCGGAAATCTGGTCAACTTTTGCTCACTCAGACAGTTGTTCCAGCTTCTTCGTCGGACCCTTTCCTACGAGCGACATTTACCTTCTCTCCTACTGCGGCAATTGGGACTTCGTCAACATTGAACTTTCGTATACCATCATGGACTCTTGCAAATGGTGCCAAGGCACTATTGAATTCTGAAACTTTACCTCTGCCAGCTCCAGGGAATTATTTGTCAATCACACGACCATGGAGTGCGAGTGACAAGCTGACCCTTCAATTGCCTCTTACCATCAGAACAGAAGCCGTAAAAGATGACAGACCTGAATTTGCATCACTTCAAGCCATTCTTTACGGACCATATCTTCTCGCCGGTCACACCACCAGCATTTGGGACATTAAAGGCGTTACTAACAAAGCTGTTGCAGACTGGATTACTCCAATTCCATCCAATTACAGTAGTCAACTAGTTTCTTATTCACAAGACATCAACAAATCAACTCTTGTTATAACCAACTCAAAACAATCACTTACGATGGAAATATTACCCGGACCTGGCACTGAAAATGCTCCTCATGCTACCTTTAGACTTATCCCAAAAGACGCTGACGGTAAAACTGTGATGTTAGAACCATTTGATCTTCCTGGAATGACTGTAAGTCACCAAGGACCAGAGAAACCTCTTATCATTGTAGATTCTTCCCATGGCGGGCCTTCTTCGGTTTTTCTTGTGGTACCGGGCTTGGATGGACGAAATCAAACAATATCTTTAGAATCACAAAGCAATAAAGATTGTTACGTGCATAGCGATATGAGTGCTGGTTCAGGAGTTAAGCTTGTGTGCAAGTCTGCTTCTGAAACTAGTTTTAACCAAGCAAATAGTTTTGTTTCAGGGAAAGGATTAAGGCAATACAATCCTATCAGCTTTGTGGCTAAAGGTGCAAATCAGAATTTTCTTTTAGAGCCACTGTTCAACTTCAGGGATGAGCACTATACAGTTTATTTCAACCTTCAAGGTTGA 2589 0.4144 MMEAFVYVFLALILCGCANSKECINNLPQSHTLRTELMASKNETWKKEVMMYQSHVHVTPSDESAWQEMIPKEMFLTQENQRDWAAKYREMKNADVSKPPVGFLKEVPLGDVRLLEGSIHAQAQKTNLEYLLMLDVDRLIWSFRKMAGLPTPGAPYGGWEKPDQELRGHFVGHYLSATAQMWASTNNNIVKDKMSALVSGLSACQEKIGTGYLSAFPTEFFDRIENLEYAWAPYYTIHKILAGLLDQYTIAGNPQGLKMVTWMVDYFYNRVMNVIQKFTVNRHYQSLNEEAGGMNDLLYRLYSLTRDPKHLELAHLFDKPCFLGVLAVQGNDIADFHANTHIPIVVGAQLRYELTGDLHYKDIGQYFMDIVNSSHAYATGGTSVGEFWRNPKRIADNLKSAETEESCSTYNMLKVSRHLFRWTKEVTYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKAQTYWKWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKHRSLYIIQYISSSFNWNSGTVNKKNHNRKSGQLLLTQTVVPASSSDPFLRATFTFSPTAAIGTSSTLNFRIPSWTLANGAKALLNSETLPLPAPGNYLSITRPWSASDKLTLQLPLTIRTEAVKDDRPEFASLQAILYGPYLLAGHTTSIWDIKGVTNKAVADWITPIPSNYSSQLVSYSQDINKSTLVITNSKQSLTMEILPGPGTENAPHATFRLIPKDADGKTVMLEPFDLPGMTVSHQGPEKPLIIVDSSHGGPSSVFLVVPGLDGRNQTISLESQSNKDCYVHSDMSAGSGVKLVCKSASETSFNQANSFVSGKGLRQYNPISFVAKGANQNFLLEPLFNFRDEHYTVYFNLQG* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1953 862 Pfam Beta-L-arabinofuranosidase, GH127 111 647 IPR012878 -
Mtr4g1953 862 Gene3D - 721 850 - -
Mtr4g1953 862 PANTHER - 9 861 - -
Mtr4g1953 862 SUPERFAMILY Six-hairpin glycosidases 168 480 IPR008928 GO:0005975
Mtr4g1953 862 PANTHER PROLINE-TRNA LIGASE (DUF1680) 9 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1953 Mtr-Chr4 32854932 32861202 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1953 K09955 - gmx:100781521 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1953 4 32854932 32861202 Mtr4g1953 4 32854932 32861202 ECH