Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1934 ATGGCATATCTTTCCCACTTACACTTCCCCACCCCCATCTCTTACTACACCACCCCCAAAACCCCAAACACCATTTTCTCATTTCACAACATTCTCCCCTTTCCCACTTCAATTCTTCGCTCACTTTCTCAACCAAAATCAATCTCCCTCCCTCGCCGGAGTCTCTCCCGCTCCGCCACGGACAACGACGATGAATTACCAGAGGAGTTAGAAAATCAGATTGATGATTATTCCGATGACGATGATGTTGATGTTATTGCCCTCGAGCGAGAAGCAAAGGAAGTTGCACTAGAGTATTCAAGCTCTTTATCTCGCGTTTTGACTATTGAAGATGAGAGGAGTGATGTCAAGGAAACAGGTAAAAACTCCAAGAGGAGTAAACCGAAGAGAAAAATTATCCCTGACAATCTTCTACCAAGGATTGCTATTGTTGGAAGACCGAACGTTGGCAAGTCAGCATTATTTAATCGTCTCGTTGGGGGAAACAAGGCAATTGTGGTGGATGAGCCTGGAGTTACGAGGGACCGTTTATATGGCCGATCGTATTGGGGAGATAATGAATTCATGGTGGTGGACACTGGTGGTGTTCTCACTGTTTCAAAATCACAAACTACCGTTATGGAAGATCTGGATATTAGTACAACCATCGGTATGGATGGTATTCCGCTTGCCTCTAGAGAGGCAGCTGTTGCCAGGATGCCATCAATGATTGAGAGACAGGCGATTGCAGCTGTGGAAGAATCACCTGTTATTATTTTCCTTGTTGACGGTCAGGCAGGTCTAACAGCAGCTGATGTGGAGATTGCTGATTGGCTACGTAAAAACTACTCAAATAAAAGTATCATTCTTGCAGTTAACAAGTGCGAATCTCCACGGAAAAGAATTATGCAGGTGTCTGAATTTTGGTCCCTCGGGTTAGAACCAATTCCAATATCAGCTATATCAGGGACTGGAACTGGAGATCTTCTTGACCTTGTTTGTTCAGGATTACAGAAAGTTGAGGAGCCACAGAATCTTGTTGAAGAAGAAGATTATGTTCCAGCAATTTCAATTGTTGGTAGACCAAATGTTGGCAAAAGTAGCATTTTGAATGCACTGGTTGGTGAGGATAGAACAATAGTCAGCCCCATCAGTGGCACTACACGTGATGCTATTGATACTGAATTTACTGGACCAGATGGCCAGAAGTTCCATCTTATTGATACTGCTGGAATCAGGAAAAGGACAACTGTAGCCTCAGCTGGAAGTACAACAGAGGCTCTGTCAGTGAATCGTGCATTTCGTGCTATTAGGCGTTCTGATGTTGTTGCTCTTGTCATTGAGGCCATGGCTTGTATCACTGAACAGGACTACAAGATAGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGTGTGATCGTTGTAAACAAGTGGGACACAATACCAAATAAAAATCAGCAGACTGCTTTATACTATGAGCAAGATGTCAGAGAGAAGCTTCGCTTACTTGATTGGGCTCCAGTAGTTTATTCTACTGCTCTAGCTGGGCAAAATGTTGACAAGATCATTGTTGCCGCTATTGAAGTCGAAAAGGAGAGATCAAGAAGACTTGGTACTTCTATATTGAATCAAGTAGTGCGGGAAGCAGTAACTTTTAAGCCTCCTCCCAGAACACGAGGTGGAAAAAGAGGGCGTGTTTACTATTGCACTCAGGCTGCTATAAGGCCGCCTACATTTGTGTTCTTTGTCAATGATGCAAAACTTTTTCCTGAAACTTACCGGCGCTTTATGGAGAAGCAGCTACGTTCAAATGCGGGATTTCCTGGTACCCCCATTCGGCTTTTGTGGCGCAGCAGAAGAAAAATGGAAAAAGATGAAGGAAAAAAGGCGACAAGGCCTAAAGAAAATTTTGCGTCACACCGTCGAAAATTGATATCAGCTACAGCTACAGCTACACAGTAG 1941 0.4364 MAYLSHLHFPTPISYYTTPKTPNTIFSFHNILPFPTSILRSLSQPKSISLPRRSLSRSATDNDDELPEELENQIDDYSDDDDVDVIALEREAKEVALEYSSSLSRVLTIEDERSDVKETGKNSKRSKPKRKIIPDNLLPRIAIVGRPNVGKSALFNRLVGGNKAIVVDEPGVTRDRLYGRSYWGDNEFMVVDTGGVLTVSKSQTTVMEDLDISTTIGMDGIPLASREAAVARMPSMIERQAIAAVEESPVIIFLVDGQAGLTAADVEIADWLRKNYSNKSIILAVNKCESPRKRIMQVSEFWSLGLEPIPISAISGTGTGDLLDLVCSGLQKVEEPQNLVEEEDYVPAISIVGRPNVGKSSILNALVGEDRTIVSPISGTTRDAIDTEFTGPDGQKFHLIDTAGIRKRTTVASAGSTTEALSVNRAFRAIRRSDVVALVIEAMACITEQDYKIAERIEKEGKGCVIVVNKWDTIPNKNQQTALYYEQDVREKLRLLDWAPVVYSTALAGQNVDKIIVAAIEVEKERSRRLGTSILNQVVREAVTFKPPPRTRGGKRGRVYYCTQAAIRPPTFVFFVNDAKLFPETYRRFMEKQLRSNAGFPGTPIRLLWRSRRKMEKDEGKKATRPKENFASHRRKLISATATATQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1934 646 Gene3D - 529 613 IPR015946 -
Mtr4g1934 646 PRINTS GTP1/OBG GTP-binding protein family signature 349 369 IPR006073 GO:0005525
Mtr4g1934 646 PRINTS GTP1/OBG GTP-binding protein family signature 423 441 IPR006073 GO:0005525
Mtr4g1934 646 PANTHER GTPASE DER 124 621 - -
Mtr4g1934 646 Hamap GTPase Der [der]. 138 613 IPR016484 GO:0005525
Mtr4g1934 646 TIGRFAM GTPase_EngA: ribosome-associated GTPase EngA 232 609 IPR016484 GO:0005525
Mtr4g1934 646 CDD EngA1 142 330 - -
Mtr4g1934 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 307 616 IPR027417 -
Mtr4g1934 646 PANTHER GTP-BINDING PROTEIN 124 621 - -
Mtr4g1934 646 MobiDBLite consensus disorder prediction 50 70 - -
Mtr4g1934 646 CDD EngA2 349 522 - -
Mtr4g1934 646 ProSiteProfiles EngA-type guanine nucleotide-binding (G) domain profile. 347 527 IPR031166 GO:0005525
Mtr4g1934 646 MobiDBLite consensus disorder prediction 613 634 - -
Mtr4g1934 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 332 IPR027417 -
Mtr4g1934 646 Gene3D - 344 527 IPR027417 -
Mtr4g1934 646 MobiDBLite consensus disorder prediction 613 646 - -
Mtr4g1934 646 Pfam KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 529 610 IPR032859 -
Mtr4g1934 646 Gene3D - 136 343 IPR027417 -
Mtr4g1934 646 Pfam 50S ribosome-binding GTPase 349 470 IPR006073 GO:0005525
Mtr4g1934 646 Pfam 50S ribosome-binding GTPase 140 287 IPR006073 GO:0005525
Mtr4g1934 646 TIGRFAM small_GTP: small GTP-binding protein domain 347 516 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1934 Mtr-Chr4 32523391 32530984 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1934 - - gmx:100777588 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1934 4 32523391 32530984 Mtr4g1934 4 32523391 32530984 ECH