Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1933 ATGTTGAAAATGGCAGCGCGGTTGAACTGGAGACCACTCTGTTCTCTCCCTCTTTCTCACTTCACGCACCAAAACCTCCGCAAACTAAACCCTAATCTTCGCTTCCACACCTCACAACTCTTCTGTTCCGCTTCTCTTCAAACCTCACCTTCACCTTCTCTCAATGCCGAACTCGACCCATATCTCCACTGTTCCATGCAACAGCAGAAGCCACTCCGAGTCGCTGTTCTTATCAGCGGCGGCGTCGACAGCAGCGTTGCTCTCCGGCTTCTTCATGCCGCCGGTCATTCTTGCACTGCTTTCTATCTCAAGATATGGTTCCAAGATGATTTTGAGAACTTTTGGACTGAATGCCCTTGGGAAGATGATTTGAAGTATGCTAAAGACGTTTGCAATCAGGTTGAAGTACCGCTAGAAGTTGTTCATTTGACCGATGAATATTGGAAAAACGTGGTTTCATACATCATTGAAGAGTATAGGTGTGGTCGAACTCCGAATCCGGATGTTCTTTGCAATACAAGAATAAAGTTTGGTGCATTTTTGGATGCAATTGGTGGTATGGGTTTTGACTATGTTGCCTCTGGGCATTATGCAAAGGTTATCCACCCATTTGCAGATGAGATGGATGGGTCTTCTGCTCTAGAACTATCAGAAGACACGGTAAAGGATCAAACTTACTTCCTATCGCACCTATCTCAGTCCCAGCTGAAGCGACTTCTCTTTCCACTTGGTTCTATTCCCAAGGATGAAGTCCGCAGGCTTGCAGCAAAATTTGATCTACCAAATAAGGATAGAAAGGATTCCCAGGGAATATGTTTTTTGGGCAAGATAAAATTCAGTGAATTTGTTGCAAGACATATTGGGGAGAAAGAAGGTATCATACTGGAAGCTGAGACAGGAGATTTCCTTGGCAAACATCGAGGCTTTTGGTTTTATACTATTGGTCAACGCCAGGGTCTAAAGCTATCTGGAGGTCCATGGTATGTTGTTGAGAAGGATGTTAAAAACAATGTAGTTTTTGTGTCCAGAAATTACTTTTCCTTTGACAAAAAAAGGCGCGTATTTCGTGTTGGATCTTTTAAATGGCTTAGTGGGATGCCTCCCAGCCAGACAAGTCAGCTTCGATGCAAGGTGAGACATGGTCCTGGGTTCTATGATTGTAGCTTACAAATGGAACTTAGAGAAGATAACTCAATTGACTCCGCTGTCGTCTGCATATCTGAAGATGATCAAGGCCTAGCAGCTGGGCAGTTCACAGCCTTCTATGAGGGAAGAATATGCATTGGTTCTGGTGTAATTTTGGAGTCCGGGGATGATCAAAGTTTTCCAGTATGCGCAAAAGCTTTGGAAATTGCAAGAATGGAAGATAAATCAAAGATTGGGAAACCAGTTAAGATAAAATTTAAACCAGATAACCTGCCAGAAGTGTGTGATTCCGTAGAATTGGCAAGTAAAGCATCATAG 1464 0.4344 MLKMAARLNWRPLCSLPLSHFTHQNLRKLNPNLRFHTSQLFCSASLQTSPSPSLNAELDPYLHCSMQQQKPLRVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQDDFENFWTECPWEDDLKYAKDVCNQVEVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYAKVIHPFADEMDGSSALELSEDTVKDQTYFLSHLSQSQLKRLLFPLGSIPKDEVRRLAAKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGKHRGFWFYTIGQRQGLKLSGGPWYVVEKDVKNNVVFVSRNYFSFDKKRRVFRVGSFKWLSGMPPSQTSQLRCKVRHGPGFYDCSLQMELREDNSIDSAVVCISEDDQGLAAGQFTAFYEGRICIGSGVILESGDDQSFPVCAKALEIARMEDKSKIGKPVKIKFKPDNLPEVCDSVELASKAS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1933 487 Gene3D Translation factors 351 442 - -
Mtr4g1933 487 Gene3D - 286 345 IPR023382 GO:0016783
Mtr4g1933 487 Hamap tRNA-specific 2-thiouridylase MnmA [mnmA]. 72 434 IPR004506 GO:0008033|GO:0016740
Mtr4g1933 487 Pfam Aminomethyltransferase beta-barrel domain 353 433 IPR046885 -
Mtr4g1933 487 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 73 318 - -
Mtr4g1933 487 Pfam tRNA methyl transferase PRC-barrel domain 281 343 IPR046884 -
Mtr4g1933 487 TIGRFAM trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 73 433 IPR004506 GO:0008033|GO:0016740
Mtr4g1933 487 Pfam tRNA methyl transferase HUP domain 73 276 - -
Mtr4g1933 487 CDD tRNA_Me_trans 73 433 IPR004506 GO:0008033|GO:0016740
Mtr4g1933 487 PANTHER - 55 466 - -
Mtr4g1933 487 Gene3D HUPs 59 285 IPR014729 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1933 K21027 - gmx:100785275 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1933 4 32514004 32518484 Mtr4g1933 4 32514004 32518484 ECH