Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1928 ATGTCGCTAATACCCATCAACAACCGTCAAGGCAACAGTTCCAACACATCTCTTAACCTTTGGGATCCAAATCCCCTATCTCTATGGGATCCATTCATGGATTTCCACTTCCCACTCCCTTCACCCATCACCAATTTCTTCCCTGATTTCAGCTTCGGATCATCCCTAAACACCCGTATGGATTGGAGAGAGACACCGAGAGCTCATATTTGGAAGGTGGTGCTTCCTGGTTTCACAAACGAAGATGTGTTTGTTGAGCTTCAAGATGAGAGAATGCTTCAGGTTAGTGTTGAGAGTGGTAATTTCATGAGTAGGTTTAAGATTCCTGATGATGGTAACCTTCAAGAGCTTAAAGCGAATATGGTTAATGGTGTTCTTGTTGTCACTGTTCCGAAGATTCAACAATCTTCTGGTTCTGGTGGGAGGAACATTAGGGTTGTTGAAATTGAAGGCACCGACTGA 462 0.4372 MSLIPINNRQGNSSNTSLNLWDPNPLSLWDPFMDFHFPLPSPITNFFPDFSFGSSLNTRMDWRETPRAHIWKVVLPGFTNEDVFVELQDERMLQVSVESGNFMSRFKIPDDGNLQELKANMVNGVLVVTVPKIQQSSGSGGRNIRVVEIEGTD* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1928 153 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 152 - -
Mtr4g1928 153 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 152 - -
Mtr4g1928 153 Gene3D - 23 146 IPR008978 -
Mtr4g1928 153 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 51 150 IPR002068 -
Mtr4g1928 153 Pfam Hsp20/alpha crystallin family 89 146 IPR002068 -
Mtr4g1928 153 SUPERFAMILY HSP20-like chaperones 38 136 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1928 Mtr-Chr4 32459811 32460769 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1928 K13993 - gmx:100797426 192.2