Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1915 ATGCATCAAACTTGTCTATGTGCTACTCTCCCACTGCAGTCAAAGAGAAATTCTTCAATAACAACCTCTTTCAAGCTTACAAAACCATCACAATCCACTCACACAAGAACAATTAGGTCTCAAAGCATGTTACATTCCCACACCCCAACAAACCATAAATGGTCTCTTAACGGCATGACAGCTCTTGTTACAGGTGGAACTCGCGGAATTGGGTATGCCATTGTGGAGGAATTGATGGGGTTTGGTGCTAAAGTGCATACTTGTGCTAGAAATGAAGATGATCTTAATAAGTGTTTGAAGGATTGGAATCATTTGGGTTTTGAGGTTACTGGTTCGATTTGTGATGTGTCAGTTCCACAACAGAGGGAAGTGCTTATGGAGGATGTTTCTTCTGTCTTCAATGGGAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTCGGAAACCAATGATAGACTTCACAGCTGCAGAGTTTTCCAGACTCATTGATACCAATTTAGGATCCACCTTTCATATGTGCCAGCTTGCATATCCACTTCTCAAAGCATCAGGAGTGGGTAGTGTTGTTTTTATATCTTCTGTTTCTGGCTTTGTCTCACTGAAGTCAATGTCTGTTCAAGGAGCAACAAAAGGGGCAATTAATCAACTTACGAGAAATCTAGCTTGTGAATGGGCAAAAGACAACATAAGGAGTAATGCAGTTGCACCTTGGTACATCAGAACTTCGATGGTAGAGCAAGTTCTGAGCAACAAAGACTATTTGGAAGAGGTGTACTCTCGAACTCCCCTAAGACGCCTAGGCGATCCAGCAGAAGTGTCTTCTCTTGTTGCCTTTCTTTGCTTACCAGCTTCGTCATACATCACTGGGCAGATTATATGTGTTGATGGAGGAATGTCCATCAATGGTTTCTCCCCGACACACATCTAA 933 0.4191 MHQTCLCATLPLQSKRNSSITTSFKLTKPSQSTHTRTIRSQSMLHSHTPTNHKWSLNGMTALVTGGTRGIGYAIVEELMGFGAKVHTCARNEDDLNKCLKDWNHLGFEVTGSICDVSVPQQREVLMEDVSSVFNGKLNILINNVGTNIRKPMIDFTAAEFSRLIDTNLGSTFHMCQLAYPLLKASGVGSVVFISSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIRTSMVEQVLSNKDYLEEVYSRTPLRRLGDPAEVSSLVAFLCLPASSYITGQIICVDGGMSINGFSPTHI* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1915 310 MobiDBLite consensus disorder prediction 24 50 - -
Mtr4g1915 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 58 303 IPR036291 -
Mtr4g1915 310 PANTHER TROPINONE REDUCTASE 33 309 IPR045000 GO:0016491
Mtr4g1915 310 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 33 309 - -
Mtr4g1915 310 Gene3D - 49 304 - -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 60 77 IPR002347 -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 135 146 IPR002347 -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 182 198 IPR002347 -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Mtr4g1915 310 PRINTS Glucose/ribitol dehydrogenase family signature 264 284 IPR002347 -
Mtr4g1915 310 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 146 IPR002347 -
Mtr4g1915 310 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 188 196 IPR002347 -
Mtr4g1915 310 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Mtr4g1915 310 Pfam Enoyl-(Acyl carrier protein) reductase 67 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1915 Mtr-Chr4 32374560 32378258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1915 51 306 Miscellaneous Gene Families AT2G29290 61.719 1.92e-117 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1915 K08081 - gmx:100799534 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1915 4 32374560 32378258 Mtr4g1915 4 32374560 32378258 ECH