Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1910 ATGGCATCATCAACAGCACTCTTCAGTTTCAAACTCTCTCTATTCAACTCACTTCACCATCAAAGAGTAAAGAATTCAAAAGCTTCGTTCTCTAATTCTCATATCAATCCACGCATCATTTCTTCTTCCACAAACAATCATTTGTCGCCAACACGTGTCACTTATCCACTTCTTACCTCTCACTCCTCTCATAAACGTAGATTCCAAGTTCAAGCGCAGGAGTATTCTGCTGGGAACAATTCTGAGTCTGTTGCTTCCGACCAAGAGAAATTTTCTTGGTCTTCTGTTATTCTTCCGTTTGTTTTCCCTGCATTGGGTGGCTTGCTGTTTGGTTATGATATTGGTGCCACATCCGGTGCTACAATTTCACTGCAGTCACCTGAGCTTAGCGGTGTCGCTTGGTCCAATCTTTCTTCCATTCAGCTTGGTCTTGTGGTCAGTGGTTCCCTCTATGGGGCTCTTCTTGGCTCACTTCTAGCATTTGCAATTGCTGATTTCATTGGGAGGAAGCGGCAACTTATTGGTGCAGCCCTGTTGTATGTACTTGGTAGTGCAATCACTGCCACAGCACCAGAACTTGGTGTTCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTCTGGCCATGCATGGAGCTCCTTTATACATTGCAGAAACTTGTCCATCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATCGTTTTGGGGATTCTGTTGGGTTATTTTGTGGGAAGCTTTCAGATTAGTACAGTAGGTGGATGGAGGTTCATGTATGGATTTAGTGCTCCACTTGCTGTGTTGATGGGACTCGGAATGTGGACTCTCCCCGAATCTCCTCGGTGGTTGCTTCTCAATGCCGTACAAGGAAAAGGTTCTTTTCAAGATTTGAAGGAAAAAGCAATTGTTTCCCTGGGCAAACTAAGGGGCCGGCCACCTGGTGACAAAGAATCTGAGAAGCAGATAGAAGAGAGCCTTGTCTCGTTGAAGTCTGCCTATGAAGATCAGGAATCCGAGGCGAGTTTCTTAGAGGTGTTTCAGGGTCCCAATCTGAAAGCATTCGTAATTGGCGGGGGGCTAGTATTATTTCAACAGATAACAGGTCAACCTAGTGTTCTGTATTATGCTGGTCCTATTCTTCAGAGTGCTGGATTTTCTGCTGCAGCTGACGCGGCTAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTAGTAATGACATCGGTTGCTGTCCTAAAAGTGGACGATTTGGGGAGAAGACCTCTGCTGATTGGAGGTGTCAGTGGCATTGCCTTATCTTTAGTTCTCCTTTCTGCTTATTATAAATTTCTCGGAGGGCTACCAATTGTTGCTGTTGCAGCGTTACTTCTTTATGTTGGTTGCTACCAGATATCATTTGGGCCGATAAGTTGGCTGATGGTATCCGAAATCTTCCCACTTCGCACTAGAGGCCGGGGGATTAGTATGGCTGTTCTTACCAACTTTGCTGCCAATGCTGTTGTTACCTTTGCATTCTCACCATTGAAGGAGTATCTAGGAGCAGAGAACCTTTTTCTCCTTTTTGCAGCCATTGCTTTAGTGTCACTTGTGTTCATTGTAACTTCTGTCCCAGAGACAAAAGGCTTGAGCTTAGAAGAAATTGAATCCAAAATCTTGAAGTGA 1671 0.4428 MASSTALFSFKLSLFNSLHHQRVKNSKASFSNSHINPRIISSSTNNHLSPTRVTYPLLTSHSSHKRRFQVQAQEYSAGNNSESVASDQEKFSWSSVILPFVFPALGGLLFGYDIGATSGATISLQSPELSGVAWSNLSSIQLGLVVSGSLYGALLGSLLAFAIADFIGRKRQLIGAALLYVLGSAITATAPELGVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFQISTVGGWRFMYGFSAPLAVLMGLGMWTLPESPRWLLLNAVQGKGSFQDLKEKAIVSLGKLRGRPPGDKESEKQIEESLVSLKSAYEDQESEASFLEVFQGPNLKAFVIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADAAKVSVVIGLFKLVMTSVAVLKVDDLGRRPLLIGGVSGIALSLVLLSAYYKFLGGLPIVAVAALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISMAVLTNFAANAVVTFAFSPLKEYLGAENLFLLFAAIALVSLVFIVTSVPETKGLSLEEIESKILK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1910 556 ProSitePatterns Sugar transport proteins signature 1. 160 177 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g1910 556 PRINTS Sugar transporter signature 107 117 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 PRINTS Sugar transporter signature 197 216 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 PRINTS Sugar transporter signature 368 378 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 PRINTS Sugar transporter signature 455 476 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 PRINTS Sugar transporter signature 478 490 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 ProSitePatterns Sugar transport proteins signature 2. 202 227 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g1910 556 Pfam Sugar (and other) transporter 102 551 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr4g1910 556 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 41 556 - -
Mtr4g1910 556 SUPERFAMILY MFS general substrate transporter 89 551 IPR036259 -
Mtr4g1910 556 Gene3D MFS general substrate transporter like domains 89 554 IPR036259 -
Mtr4g1910 556 CDD MFS_GLUT10_12_Class3_like 102 550 - -
Mtr4g1910 556 ProSiteProfiles Major facilitator superfamily (MFS) profile. 99 543 IPR020846 GO:0022857
Mtr4g1910 556 Coils Coil 323 343 - -
Mtr4g1910 556 TIGRFAM SP: MFS transporter, sugar porter (SP) family 87 550 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g1910 556 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 41 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1910 Mtr-Chr4 32325511 32332718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1910 16 556 Organic Solute Cotransporters AT5G59250 72.344 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1910 - - gmx:100809316 860.522