Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1901 ATGCATATCAAAATGATTGTCACTGTTCCATTATCAAAGGCTCTTTTTGCAGCCTTTCTCTTTGTCACCACCTTCCTCTTAACCTCCCCTGGATTTGTTTTGGCTACTTCACAGCATGGAAGTGTTACAAGACACTACAAATTCGATATAAGGTTGGCAAACGTTACGAGGCTGTGCCACACAAAAAGCATGGTCACCGTGAATGGGAAGTTCCCGGGTCCTCGAATTGTTGTTAGAGAAGGGGACAGATTGTTGGTTAAGGTTGTTAATCATGTTCCAAACAATATCAGCTTGCATTGGCATGGTGTGAGACAACTTCGTAGTGGTTGGTCGGATGGTCCATCATACATAACTCAATGCCCAATTCAAACAGGTCAGAGTTATGTGTACAACTTCACCATTGTTGGACAAAGAGGAACTCTTTTCTGGCATGCTCATTTCTCATGGTTAAGAGCTACTGTCTATGGACCTCTCATCCTTCTCCCAAGGCACAATGAATCTTATCCTTTTCAAAAACCCTACAAGGAAGTCCCCATTCTCTTTGGTGAGTGGTGGAATGCAGATCCTGAAGCTGTAATTGCACAAGCTCTTCAGACAGGGGGTGGCCCAAATGTTTCTGATGCCTACACCATTAATGGGTTTCCTGGACCTCTTTACAATTGCTCCAAAGATACATACAAATTGAAGGTGAAGCCAGGAAAAACATATTTACTACGTTTAATCAACGCTGCACTCAATGACGAACTCTTTTTCAGCATTGCTAATCACACATTAATCATTGTTGAAGCAGATGCATCTTACATTAAACCATTCGAGTCCAATACCATCATACTTGGACCAGGTCAAACCACAAATGTTCTATTAAAAACAAAACCAAATTACCCTAATTCCACATTCTACATGCTAGCTAGACCATATTTCACAGGGCAGGGTACTTTCGACAATTCCACAGTAGCTGGAATTTTAGAATACACTAAACCAAATGATCAAACAAATTTAAATCTCCCTATTCTAAAACCTGTGCTTCCAGTCATCAATGATACTAATTTTGTTGCTAATTTTAGTAACAAATTTCTTAGCTTAAATAGTCCAAAATACCCCGCAAATGTGCCAAAAACTATTGACAAAAACTTTTTCTTTATCGTTGGACTAGGAACTAGTCCATGCCCAAAAAACCAAACATGTCAAGGACCAAATAATAGTTCAAAATTTGCAGCTTCAATGAACAATGTATCATTTGCTTTACCTTCTATAGCACTTCTTCAACAACATTTCTTTGGAGCTAATAATGGTTTTACAACGGATTTTCCGGTTGTACCGTTAAGGCCGTTTAATTATACAGGAACACCTCCAAACAATACTTTGGTTAGTAATGGAACAAAGACAGTGGTGATACCATATAACACTAGAGTTCAGGTTATATTGCAGGATACAAGCATTTTGGGAGCTGAGAGTCATCCTTTGCATCTTCATGGATTTAATTTCTTTGTTGTTGGTCAAGGTTTTGGAAATTTTAATGCTAGTAGTGACCCTGCAAAGTTTAATCTTGTTGATCCTGTTGAGAGGAATACTGTTGCTGTGCCTTCTGGTGGTTGGGTTGCGATACGATTCCTTGCTGACAATCCAGGTGTTTGGCTGATGCATTGCCACTTTGATGTGCACCTTAGTTGGGGATTGAGGATGGCTTGGATTGTTGAAGATGGAAAGTTACCAGATCAAAAATTGCCTCCTCCTCCTAAGGATCTCCCCAAATGTTGA 1758 0.397 MHIKMIVTVPLSKALFAAFLFVTTFLLTSPGFVLATSQHGSVTRHYKFDIRLANVTRLCHTKSMVTVNGKFPGPRIVVREGDRLLVKVVNHVPNNISLHWHGVRQLRSGWSDGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHFSWLRATVYGPLILLPRHNESYPFQKPYKEVPILFGEWWNADPEAVIAQALQTGGGPNVSDAYTINGFPGPLYNCSKDTYKLKVKPGKTYLLRLINAALNDELFFSIANHTLIIVEADASYIKPFESNTIILGPGQTTNVLLKTKPNYPNSTFYMLARPYFTGQGTFDNSTVAGILEYTKPNDQTNLNLPILKPVLPVINDTNFVANFSNKFLSLNSPKYPANVPKTIDKNFFFIVGLGTSPCPKNQTCQGPNNSSKFAASMNNVSFALPSIALLQQHFFGANNGFTTDFPVVPLRPFNYTGTPPNNTLVSNGTKTVVIPYNTRVQVILQDTSILGAESHPLHLHGFNFFVVGQGFGNFNASSDPAKFNLVDPVERNTVAVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPDQKLPPPPKDLPKC* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1901 585 PANTHER MULTI-COPPER OXIDASE 20 585 IPR045087 -
Mtr4g1901 585 PANTHER LACCASE-17 20 585 - -
Mtr4g1901 585 SUPERFAMILY Cupredoxins 40 189 IPR008972 -
Mtr4g1901 585 Gene3D - 33 161 IPR008972 -
Mtr4g1901 585 CDD CuRO_3_LCC_plant 432 568 IPR034289 GO:0005507
Mtr4g1901 585 CDD CuRO_2_LCC_plant 177 324 IPR034285 -
Mtr4g1901 585 SUPERFAMILY Cupredoxins 371 585 IPR008972 -
Mtr4g1901 585 ProSitePatterns Multicopper oxidases signature 2. 548 559 IPR002355 GO:0005507
Mtr4g1901 585 CDD CuRO_1_LCC_plant 46 162 IPR034288 GO:0005507
Mtr4g1901 585 Pfam Multicopper oxidase 447 568 IPR011706 GO:0005507|GO:0016491
Mtr4g1901 585 Gene3D - 392 585 IPR008972 -
Mtr4g1901 585 Pfam Multicopper oxidase 53 163 IPR011707 GO:0005507
Mtr4g1901 585 Gene3D - 174 363 IPR008972 -
Mtr4g1901 585 ProSitePatterns Multicopper oxidases signature 1. 543 563 IPR033138 -
Mtr4g1901 585 SUPERFAMILY Cupredoxins 170 361 IPR008972 -
Mtr4g1901 585 TIGRFAM laccase: laccase 43 585 IPR017761 GO:0046274|GO:0048046|GO:0052716
Mtr4g1901 585 Pfam Multicopper oxidase 176 326 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1901 Mtr-Chr4 32206365 32209807 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1901 K05909 - gmx:100811833 986.482