Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1897 ATGGAAAACGGGCATAAATTCCAGGAAGTTTCCAACCCAAAATATGATTGTCTCTTGTTTGATATTGATGACACACTTTATCCTTTGAGTTCTGGAATTTCAGCGCAAACAGCAAAAAATATTGAAGAGTATATGCTTCAAAAGCTTGGAATGGAGGCTGCTACGGTTCCTGAATTGTGCTATTCATTATACAAGACTTATGGGACAACAATGGCTGGTCTTAGGGCAATTGGCTACGACTTTGACTACAACGACTTTCATAGTTTTGTTCATGGGAGATTGCCATATAATCTACTTAAACCAGACCCTGTTCTCAAGGGCATTTTGCAAAGCTTGCCTTTTAGGAAAGTGCTTTTTACCAATGCAGACATGGGACATGCGAGTAGAGTGCTTAAAAGACTTGGACTCGAGGACTGTTTTGAAAGAATTATTAGCTTTGATACCCTGAATTCCTCTGACAGCATCATCCCTTCTAATGAAAAAGTTGGCAGTGAAATTTTTGATTTCTGTGAGTACACACGCCGTCCTGATTCTGATACGGTGCTTCCAAAGACACCAGTTGTCTGCAAACCTTTTGAAGATGCATTTGAAAAGGCATTCAAGTTGGCTGACATTGACCCTCAAAGAACATTGTTCTTCGATGACAGTATCCGCAATTTACAGACAGCTAATCGTTTGGGCCTCCATACAGTTGCGGTTGGTACATCCGTGCGCAGTACAGGAGTGGATCATGCATTAGAGAGTATTCATAATATCAGAGAGGCATTTCCAGAGCTATGGGAAGTCGACGAGAAGCATGAAATCGTCAACTACAAGGTTGCAATTGAAACAACAGTAAAAGCATAG 846 0.409 MENGHKFQEVSNPKYDCLLFDIDDTLYPLSSGISAQTAKNIEEYMLQKLGMEAATVPELCYSLYKTYGTTMAGLRAIGYDFDYNDFHSFVHGRLPYNLLKPDPVLKGILQSLPFRKVLFTNADMGHASRVLKRLGLEDCFERIISFDTLNSSDSIIPSNEKVGSEIFDFCEYTRRPDSDTVLPKTPVVCKPFEDAFEKAFKLADIDPQRTLFFDDSIRNLQTANRLGLHTVAVGTSVRSTGVDHALESIHNIREAFPELWEVDEKHEIVNYKVAIETTVKA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1897 281 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 232 IPR010237 -
Mtr4g1897 281 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 281 - -
Mtr4g1897 281 SUPERFAMILY HAD-like 13 259 IPR036412 -
Mtr4g1897 281 Gene3D - 5 99 - -
Mtr4g1897 281 SFLD Haloacid Dehalogenase 11 262 - -
Mtr4g1897 281 Gene3D - 102 268 IPR023214 -
Mtr4g1897 281 SFLD C1.5.3: 5'-Nucleotidase Like 11 262 IPR010237 -
Mtr4g1897 281 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 281 - -
Mtr4g1897 281 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 181 233 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1897 Mtr-Chr4 32155288 32159165 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1897 K07025 - gmx:100807717 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1897 4 32155288 32159165 Mtr4g1897 4 32155288 32159165 ECH
Mtr2g3368 2 47747337 47750211 Mtr4g1897 4 32155288 32159165 PCT