Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1887 ATGGGTACTCCGCAGAAGGAGAATGAAAGCAAGGGCTTCTTCTCCGCGATGTCTTCCCGTTTTTCCGTCTTCAGCAACGCTATGACCCGATCTGTTAACGGGCTTCTTGGATATGAAGGTGTAGAAGTTATAAACCCAGATGGTGGTAAAGATGATGTAGATGATGAAGTTCAGAGAGGAAGATGGAAACCTGAGGAAAGAGATGGTTACTGGAAGATGATGCAGAATTATATTGGCGCAGATGTAACGTCACTGGTGACGCTGCCGGTTATTATATTTGAACCAATGACTATGCTTCAGAAAATGGCTGAGTTGATGGAGTACTCTCACTTGTTAGATCAAGCAGATCAATCAGAGGATCCATACATGCAGTTGGTTTATGCATCATCGTGGGCTATATCTGTGTACTTTGCATACCAACGAACTTGGAAACCTTTTAATCCTATCCTTGGAGAGACTTATGAATTGACTAACCATAATGGAATTACATTTCTTGCGGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCCGAGAATGAACATTTTACATATGACGTTACTTCAAAGTTAAAAACTAAGTTTTTGGGGAATTCTGTTGATGTGTACCCTGTTGGAAGAACGCGTGTGACCCTTAAGAAGCATGGTGTAGTCTTGGATCTGGTGCCGCCTCCTACAAAGGTTAATAACCTGATTTTTGGCCGGACTTGGATTGATTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGAGACAAAGCCGTACTCTACTTTCAACAATGTGGATGGTTTGGTGCTGGTCGCTACGAAGTGGATGGTTATGTTTACAATTCTTCTGAAGAGCCCAAAATTTTGATGACTGGGAAGTGGAATCAGTCAATGAATTATCAACCTTGTGATTCAGAAGGAGAGCCTCTTCCTAACACAGAATTGAAAGAGGTTTGGCACATTGCTGATGTTCCACCAAATGATAAATTCCAGTACACACATTTTGCTCATAAATTAAACAGCTTTGACACTGCCCCTAGAAAGTTGTTGGCATCAGACTCCCGTCTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTGTCAAAATCCGGGACAGAAAAGAGCAGTTTGGAGGAGAGGCAGCGTGCTGAAAAGAGAGCCAGGGAAGAAAAGGGGCAAAAATTTGCACCAAGATGGTTTGAGTTGACTGAAGAAGTGACATCGACTCCTTGGGGTGATTTGGAAATCTACCAATATAATGGTAAATATGCGGAATATCGGGCTGCTGCAGATAACTCTGGCAGTATTGATAATGTTGATGTTAAATCAATTGAGTTCAATCCATGGCAGTTTGCTGACTTGGCCACGGAATGA 1374 0.4265 MGTPQKENESKGFFSAMSSRFSVFSNAMTRSVNGLLGYEGVEVINPDGGKDDVDDEVQRGRWKPEERDGYWKMMQNYIGADVTSLVTLPVIIFEPMTMLQKMAELMEYSHLLDQADQSEDPYMQLVYASSWAISVYFAYQRTWKPFNPILGETYELTNHNGITFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVTLKKHGVVLDLVPPPTKVNNLIFGRTWIDSPGEMIMTNLTTGDKAVLYFQQCGWFGAGRYEVDGYVYNSSEEPKILMTGKWNQSMNYQPCDSEGEPLPNTELKEVWHIADVPPNDKFQYTHFAHKLNSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGTEKSSLEERQRAEKRAREEKGQKFAPRWFELTEEVTSTPWGDLEIYQYNGKYAEYRAAADNSGSIDNVDVKSIEFNPWQFADLATE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1887 457 Pfam Oxysterol-binding protein 70 427 IPR000648 GO:0008289
Mtr4g1887 457 SUPERFAMILY Oxysterol-binding protein-like 63 438 IPR037239 -
Mtr4g1887 457 MobiDBLite consensus disorder prediction 363 390 - -
Mtr4g1887 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3B 4 453 - -
Mtr4g1887 457 Gene3D - 151 328 - -
Mtr4g1887 457 MobiDBLite consensus disorder prediction 372 390 - -
Mtr4g1887 457 ProSitePatterns Oxysterol-binding protein family signature. 167 178 IPR018494 -
Mtr4g1887 457 Gene3D - 359 450 - -
Mtr4g1887 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 4 453 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1887 Mtr-Chr4 32033770 32039920 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1887 - - gmx:100779808 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1887 4 32033770 32039920 Mtr4g1887 4 32033770 32039920 ECH