Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1886 ATGTTGTATTTATGTATCTATAAACGGCAAAGGCTAAGATGGTTTGGTTCAAAGTCAGTTCTCAATGCAGTATATGCTGATGCTGAGGAGGATCTATCTATGGCTCTTGCATTAGCCAGCACATGGACCATGTTCATTGCATTTGGAAGTTTAGTGTGTATTGGGCCAATATCTTACACCGTTGGCATGGCTTATCAAAATGCCTTCAGTTCAGTTAAGGTGCTTCAAGGACTGTGGAGGAATGATTTGGTGTCACTAAAAGGTGCATGTCCAAATTGTGGAGAAGAGGTATTCGCATTTGTGAGAATAGACAGGAATATTGACTCACCTCACAAACAGATTGTCATGTGTGTGTGTGAATGCTTATTAGAATTTCGCACCAACATGGAGCGATCAGTTTCAAGATTCGGTAGACAGTGGGTTTATGGGCGTATTCACCTTGTTTCACCGAGAGGAAGATCCCAACGCCAAAGGCAACTGTAA 483 0.4203 MLYLCIYKRQRLRWFGSKSVLNAVYADAEEDLSMALALASTWTMFIAFGSLVCIGPISYTVGMAYQNAFSSVKVLQGLWRNDLVSLKGACPNCGEEVFAFVRIDRNIDSPHKQIVMCVCECLLEFRTNMERSVSRFGRQWVYGRIHLVSPRGRSQRQRQL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1886 160 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 10 71 IPR039987 GO:0009535|GO:0009773|GO:0016730
Mtr4g1886 160 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 68 153 IPR039987 GO:0009535|GO:0009773|GO:0016730
Mtr4g1886 160 PANTHER PGR5-LIKE A PROTEIN 10 71 - -
Mtr4g1886 160 PANTHER PGR5-LIKE A PROTEIN 68 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1886 Mtr-Chr4 32025965 32027887 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1886 - - gmx:100810752 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1886 4 32025965 32027887 Mtr4g1886 4 32025965 32027887 ECH
Mtr2g3356 2 47622673 47626684 Mtr4g1886 4 32025965 32027887 PCT