Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1872 ATGGGCACACCTTTCTTTGAATTCAAAAAACAAGCTTCATTCTTCCTCAAAGAGAAAATCAAGACTGCTAGATTAGCTCTAACAGATGTCACCCCTGCAGAACTAATGATAGAAGAGGCAACTAATGGAAATCCATGGGCACCAACTACTGTAACCCTCAGATCAATTTCAAAGGCTGCTTTTGAGCTAGATGATTATAGGAGGATTATAGAGATTCTACATAAAAGATTGGCTAAATTTGAAAAGAAGAATTGGAGGGCCTCTTACAATTCCTTGATTGTGCTTGAGCATTTGTTGACTCATGGACCAGAAAGTGTAGCAGAGGAATTTCAGAGTGACAAAGATGTTATTAGCCAGCTGAAAGGTTTCCAATATATTGATGAGAACGGGTTCAATTGGGGCCTAACTGTGAGAAAGAAATCAGAGAGAGTAATGAAACTGTTGGAAGAAGGAAATCTTCTAAAGGAAGAAAGAAACCAATGTAGAAGGTTATCAAGAGGTATTCAAGGTTTTGGAAGTTTCACTCAAAGATCAACTCCAACACAAGCCATTCTTCGCGAGAAATCATTGCCAACCACATTTGGTAGATGTAATTCCGACTCAAACAACTACGAAGATCAGGAAAATAATTCATCTTTCTCAACCTTGGGTAGCATGAAAACCACGATATACAAAGATGATGATATTGGCAACAATCAATTGCTTCAAAAATCTGAATCAAGTTCTAAAGAAAATATGGAACCAAGTAGGGAGGTGTGGAACTTGGATGGAGAATCAGAATCACTTTTGGATTGTGAAGAAGAGGATTCTTCTAGGCTTGGGAGGTTCAAAATAGAAGATGATCACCCCTTTAATTCAACAACAGAAATGAATAGTACTGCTTCATTGCTTTCTGCTAGAGATGGAATACTACAAGGGTGTTGA 924 0.3799 MGTPFFEFKKQASFFLKEKIKTARLALTDVTPAELMIEEATNGNPWAPTTVTLRSISKAAFELDDYRRIIEILHKRLAKFEKKNWRASYNSLIVLEHLLTHGPESVAEEFQSDKDVISQLKGFQYIDENGFNWGLTVRKKSERVMKLLEEGNLLKEERNQCRRLSRGIQGFGSFTQRSTPTQAILREKSLPTTFGRCNSDSNNYEDQENNSSFSTLGSMKTTIYKDDDIGNNQLLQKSESSSKENMEPSREVWNLDGESESLLDCEEEDSSRLGRFKIEDDHPFNSTTEMNSTASLLSARDGILQGC* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1872 307 Coils Coil 63 83 - -
Mtr4g1872 307 CDD ENTH 33 149 - -
Mtr4g1872 307 SUPERFAMILY ENTH/VHS domain 11 158 IPR008942 -
Mtr4g1872 307 ProSiteProfiles ENTH domain profile. 25 158 IPR013809 -
Mtr4g1872 307 MobiDBLite consensus disorder prediction 236 261 - -
Mtr4g1872 307 PANTHER EPSIN/ENT-RELATED 5 299 - -
Mtr4g1872 307 SMART enth_2 31 158 IPR013809 -
Mtr4g1872 307 PANTHER EPSIN-2-LIKE 5 299 - -
Mtr4g1872 307 Pfam ENTH domain 31 153 IPR013809 -
Mtr4g1872 307 Gene3D - 27 174 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1872 Mtr-Chr4 31920672 31922672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1872 K12471 - gmx:100811093 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1872 4 31920672 31922672 Mtr4g1872 4 31920672 31922672 ECH