Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1857 ATGGCTTCTTCTTCTTCTTCCTCCACCAACTCACTTCTCATTTCAACCTTTATCTTTCTCACCATATTCTCACCCTCTCAAGCCCTAATATTCACCTTTGTAAACAACTGCCCGTACACCGTCTGGCCAGCTATCATCCCCAACGGCGGCTTCCCCGTCCTATCCAGCAGCGGCTTCGAACTCCGTCACTTCACTCACCTCTCCATCCCCGTCCCAGACACCCACTGGGCCGGCCGTGCATGGGCCAGAACCGGCTGCTCCACCGCCAACAACAAATTCTCCTGTCTCACCGGCGACTGTGGCAACAGTCTCCAATGCCACGGAGCAGGTGGCTCACCACCTGCAACCCTAGTACAGTTCGACGTACACCACGGTAACAAAGACTTTTCATCTTACAGTGTTAGTCTTGTCGATGGTTTCAACACTCCTTTGACAGTTACACCGCATGAAGGTAAAGGTGAGTGTCCAGTGGTAGGTTGCAAAGCTGATCTTGTTGCTTCATGTCCTCCTGTTTTGCAGCACCGTGTTCCAATGGGTCATGGTCCTGTTGTGGCTTGTAAGAGTGGTTGTGAAGCTTTTCACAGTGATGAACATTGTTGTAGGAACCATTTTAACAACCCACAAACTTGTAAACCTACTGTGTACTCCAAGTTCTTTAAGGATGCTTGTCCTGCAACGTTTACGTTTGCTCATGATTCTCCTTCTTTGATTCATCAGTGTTCTTCACCGGGTGAACTTAAGGTTATCTTTTGCCATTGA 759 0.4888 MASSSSSSTNSLLISTFIFLTIFSPSQALIFTFVNNCPYTVWPAIIPNGGFPVLSSSGFELRHFTHLSIPVPDTHWAGRAWARTGCSTANNKFSCLTGDCGNSLQCHGAGGSPPATLVQFDVHHGNKDFSSYSVSLVDGFNTPLTVTPHEGKGECPVVGCKADLVASCPPVLQHRVPMGHGPVVACKSGCEAFHSDEHCCRNHFNNPQTCKPTVYSKFFKDACPATFTFAHDSPSLIHQCSSPGELKVIFCH* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1857 252 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 14 252 - -
Mtr4g1857 252 SMART tha2 31 252 IPR001938 -
Mtr4g1857 252 Gene3D Thaumatin 30 251 IPR037176 -
Mtr4g1857 252 PANTHER OS03G0233200 PROTEIN 14 252 IPR001938 -
Mtr4g1857 252 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Mtr4g1857 252 PRINTS Pathogenesis-related protein signature 79 90 IPR001938 -
Mtr4g1857 252 PRINTS Pathogenesis-related protein signature 91 120 IPR001938 -
Mtr4g1857 252 PRINTS Pathogenesis-related protein signature 242 251 IPR001938 -
Mtr4g1857 252 CDD TLP-PA 30 251 - -
Mtr4g1857 252 SUPERFAMILY Osmotin, thaumatin-like protein 30 251 IPR037176 -
Mtr4g1857 252 Pfam Thaumatin family 35 251 IPR001938 -
Mtr4g1857 252 PIRSF PR5 1 252 IPR001938 -
Mtr4g1857 252 ProSiteProfiles Thaumatin family profile. 28 252 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1857 Mtr-Chr4 31697797 31698827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1857 1 251 Receptor kinase-like Gene Family AT5G38280 36.328 7.86e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1857 - - cam:101503313 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1857 4 31697797 31698827 Mtr4g1857 4 31697797 31698827 ECH