Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1854 ATGGGAGAGAGGGTGGATAAGTCTAGCTCGACTATGAACACTAATTCTAAACAAAACAGTGCTATCACTGGGAAAAAAACGTACCAAAAACAGCTGGTTGTGTCGCGTCCCAAAGGCTTTGCACAAAGATATTGTGAACCCCTTGTTTCATTGACGCATGGTGACTTTGGAAGCAGTGCTGTGGGGCGTGCTGCATTTTGTTTAGTTAAAGTTGCTGCTTTAGAGGCTGTACGGAGACTCACAAAGAGTAGATGCCCTTGTGTCTGGCAAGGTCTGCAGGGTCTACAAATCCTTGCCTACCCACCATTTAAATGGATTCAAAAGTGGGCTGTGTTCAGGGGTTTGGTTAAAAGCATGCAGGTACTATCAAGACCATTATTAGTTCTTTCCATTACAACAGCCCTTACTGATGCACTGGAATGTAGTGATGGAACCTCAGATCATATTACTAATTCTCATGATTCAGAAATATCTGCTGAGCCGGCTCCTGTGCAGGATAATTTGAATACTAGTCAACCCGAGAGATCTCCTGAAGTTTTAGAATATGAAAATTGGTTGACTCAACTCAACGAAGAGCTGGAAAATCAAGGGATTAGTTTGCCAGAAAGAATCAATGACGATGAGCTCCACAGATTTTACACAGCTGCTAATAATGACTTTTCATGCTTCCTTACCTCAATCAAGAAGACAATACGCTGGCGGGAGTGTTACAAAATTCTTTCAGTAGAAGAGCTGGAAATGTGGTCAAATTTGGTGTTCTGGCATGGATCTGATTTGTCGCACAGACCCTGTCTCATTGTAAGGCTTGGGATAGCTTGCAGCACATTGGCATCCCAAGATAAACCTCGATTTGCTCAGGCAATTATATCACAGGTAGAATATGGGGTCTTGCACTTTGTTGATAGAGAAAACCCTCAAATTACAGTATTGGTGGACTGTGAAGGGCTATCTCCATTGAGAATTCCCATGCAAATACTGAGATCCTGTTCTTCCATTCTGCAAGATCACTTTCCTAATCGTCTTGGTTGTTTGTTTGTCATACGACTTCCAGCAATTGCTCGTGTTATTGCCCAGACTTTTCTTCAGGTTTTAAAGCCAGCTACTAAGAAAAAGTTAAAAATAGAAGGAGAGATGTACAAGAAGGTTCTTTTTGACAATCTATCAACAGTGCCATCATATCTTGGAGGCAGCTGCACATGTGTGAAGTGTTCTAAAATGGGCAAGCGGGATAGAGTGCAACCTCATGAAACTGGGACCAGCAGCAGCAGAATTGTTAGCGAGGATGATATCAGTGACAACGAGGATTTGCCATCACTGCGTCTACATCCAACTATGGTATTAGATGACCGTCAAAGCAACAGCTATGACCAGGTGTTGAGAACCGCTGTCATAAGTATTATCGTATTTTGGGTTGTCATAGCTCTTGGTGCTGGAGTATACGAACCTGGTGTGTAA 1455 0.4261 MGERVDKSSSTMNTNSKQNSAITGKKTYQKQLVVSRPKGFAQRYCEPLVSLTHGDFGSSAVGRAAFCLVKVAALEAVRRLTKSRCPCVWQGLQGLQILAYPPFKWIQKWAVFRGLVKSMQVLSRPLLVLSITTALTDALECSDGTSDHITNSHDSEISAEPAPVQDNLNTSQPERSPEVLEYENWLTQLNEELENQGISLPERINDDELHRFYTAANNDFSCFLTSIKKTIRWRECYKILSVEELEMWSNLVFWHGSDLSHRPCLIVRLGIACSTLASQDKPRFAQAIISQVEYGVLHFVDRENPQITVLVDCEGLSPLRIPMQILRSCSSILQDHFPNRLGCLFVIRLPAIARVIAQTFLQVLKPATKKKLKIEGEMYKKVLFDNLSTVPSYLGGSCTCVKCSKMGKRDRVQPHETGTSSSRIVSEDDISDNEDLPSLRLHPTMVLDDRQSNSYDQVLRTAVISIIVFWVVIALGAGVYEPGV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1854 484 CDD SEC14 243 396 IPR001251 -
Mtr4g1854 484 SMART sec14_4 246 399 IPR001251 -
Mtr4g1854 484 MobiDBLite consensus disorder prediction 1 22 - -
Mtr4g1854 484 Pfam CRAL/TRIO domain 251 396 IPR001251 -
Mtr4g1854 484 MobiDBLite consensus disorder prediction 146 176 - -
Mtr4g1854 484 MobiDBLite consensus disorder prediction 411 437 - -
Mtr4g1854 484 Gene3D - 180 431 IPR036865 -
Mtr4g1854 484 MobiDBLite consensus disorder prediction 155 176 - -
Mtr4g1854 484 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 254 402 IPR001251 -
Mtr4g1854 484 PANTHER SEC14 CYTOSOLIC FACTOR FAMILY PROTEIN / PHOSPHOGLYCERIDE TRANSFER FAMILY PROTEIN 11 482 - -
Mtr4g1854 484 SUPERFAMILY CRAL/TRIO domain 247 401 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1854 Mtr-Chr4 31647918 31655026 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1854 - - gmx:100814843 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1854 4 31647918 31655026 Mtr4g1854 4 31647918 31655026 ECH