Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1849 ATGGCGCCAAAGGGAGAGAAGAAGCCAGCGGAGAAGAAACCCGCTGAGGAGAAGAAGTCCACCGTTGCCGAGAAAGCTCCAGCAGAGAAGAAGCCAAAGGCTGGAAAGAAGCTTCCTAAGGAAGGTGGCTCCGCAGCCGGAGAGAAGAAGAAGAAGAGAAGCAAGAAGAATGTAGAAACATACAAGATCTACATCTTCAAAGTTCTGAAACAAGTTCACCCAGACATTGGTATCTCAAGCAAGGCCATGGGTATCATGAACAGTTTCATCAATGATATCTTCGAGAAGCTTGCTCAAGAATCATCCAGACTTGCTCGTTACAACAAGAAGCCAACAATCACTTCAAGGGAAATTCAGACTGCAGTCAGACTTGTTCTTCCTGGTGAATTGGCCAAGCATGCTGTTTCTGAAGGCACCAAGGCTGTGACCAAGTTTACTAGTTCTTAG 447 0.4631 MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1849 148 MobiDBLite consensus disorder prediction 1 56 - -
Mtr4g1849 148 Gene3D Histone, subunit A 2 148 IPR009072 GO:0046982
Mtr4g1849 148 PRINTS Histone H2B signature 61 79 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PRINTS Histone H2B signature 80 100 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PRINTS Histone H2B signature 102 119 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PRINTS Histone H2B signature 119 132 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PRINTS Histone H2B signature 132 145 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PANTHER HISTONE H2B.1-RELATED 5 148 - -
Mtr4g1849 148 Pfam Core histone H2A/H2B/H3/H4 1 124 IPR007125 GO:0003677
Mtr4g1849 148 ProSitePatterns Histone H2B signature. 116 138 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 SMART h2b3 51 147 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 PANTHER HISTONE H2B 5 148 IPR000558 GO:0000786|GO:0003677|GO:0030527
Mtr4g1849 148 SUPERFAMILY Histone-fold 32 148 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1849 Mtr-Chr4 31603774 31604485 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1849 K11252 - csin:114281315 219.935