Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1841 ATGTCGGTGACTTCAAGCTCTAGAGGAAGACCAGGTACCAGAGAAACTAGCCCAGAGAGAACCAAAGTTTGGACTGAACCCAAACCCAAAACACCCAGAAAAGTCTCTGTAGTTTACTACCTCTCACGTAATGGCCACCTTGAACACCCCCATTTCATGGAAGTCCCTCTCTCTTCACCCCATGGTCTCTACCTCAAAGATGTAATCATTCGTTTGAACCTTCTCCGTGGGAAAGGAATGCCAACTATGTACTCCTGGTCCTCTAAACGGAGTTACAAGAACGGTTTCGTTTGGCACGATTTAACAGAGAGCGATTTCATCTACCCAACGCAAGGGCATGACTACATTCTCAAAGGATCTGAGATTCTCGAACATGAAACCACCGCTCGACCACCGTTGGAGGAAGAATCTGATTCTCCGGTGGTGATTACACGGCGGCGCAACCAGTCATGGAGCTCCATCGACTTAAATGAGTATCGAGTTTATAAGTCCGAGCCGTTGGGTGAAAACATCGCCGCCGACGCGTCGACGCAGACGGAGGAGAAACGGAGACGGAGAAGAGTTCTGAGGGAAGAAGATGAAGAACAAGAAGAAGAAGAAAAAGAGAAGAATGATGAAATTGAAAACGAAGGTGAAACAGAGAATCAAAATCAGAGTACGGAGCTAAGCAGGGAAGAGATTTCACCTCCGCCGTCAGATTCAAGTCCAGAAACACTGGGAACATTAATGAAAGTAGATGGACGGCTGGGATTACGATCTGTTCCTAAAGAGAATCCAACGGTTGAGAGTTGTCCAAGTGGAAGGATGAGAGCTTCATCGGTACTGTTGCAGTTGTTATCGTGCGGTGCAGTGTCTTTCAAGGAAGGGAGTGGGGCCAGTTCTGGTAAAGATCAACGGTTCTCGTTGGTTGGGCACTATAAGTCTAGACTACCCCGGGGAGGAGGAAATCATGTGGGAAAAGAAGTGGGGACATTGGTGGAAATTCCGGATTTGAATAGGGTAAGATTGGAAGATAAAGAGTACTTCAGTGGGAGTTTGATTGAAACCAAAAAAGTTGAAGCTCCTGCTTTCAAGAGGTCCTCTTCTTACAATGCAGATAGCAGTTCCCGGTTGCAGATCATGGAGCATGAAGGAGATATGGTGCGAGCAAAGTGCATACCAAGGAAATCCAAGACACTGCTAACGAAGAAAGAAGAAGGTACTTCAAGTTCCATGGATAGTGTTAGCCGTAGCCAACATGGAAGCAAAAGATTTGAGGGACAACAATAA 1269 0.4641 MSVTSSSRGRPGTRETSPERTKVWTEPKPKTPRKVSVVYYLSRNGHLEHPHFMEVPLSSPHGLYLKDVIIRLNLLRGKGMPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILEHETTARPPLEEESDSPVVITRRRNQSWSSIDLNEYRVYKSEPLGENIAADASTQTEEKRRRRRVLREEDEEQEEEEKEKNDEIENEGETENQNQSTELSREEISPPPSDSSPETLGTLMKVDGRLGLRSVPKENPTVESCPSGRMRASSVLLQLLSCGAVSFKEGSGASSGKDQRFSLVGHYKSRLPRGGGNHVGKEVGTLVEIPDLNRVRLEDKEYFSGSLIETKKVEAPAFKRSSSYNADSSSRLQIMEHEGDMVRAKCIPRKSKTLLTKKEEGTSSSMDSVSRSQHGSKRFEGQQ* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1841 422 MobiDBLite consensus disorder prediction 213 239 - -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 176 192 - -
Mtr4g1841 422 Coils Coil 179 217 - -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 397 422 - -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 13 28 - -
Mtr4g1841 422 PANTHER OS01G0839200 PROTEIN 13 390 - -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g1841 422 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 13 390 IPR010369 -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 386 422 - -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 170 240 - -
Mtr4g1841 422 PIRSF UCP031043 3 411 IPR021182 -
Mtr4g1841 422 MobiDBLite consensus disorder prediction 193 212 - -
Mtr4g1841 422 Pfam Protein SOSEKI, plant 35 128 IPR010369 -
Mtr4g1841 422 Pfam Protein SOSEKI, plant 134 368 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1841 Mtr-Chr4 31511235 31515534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1841 - - gmx:100779732 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1841 4 31511235 31515534 Mtr4g1841 4 31511235 31515534 ECH