Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1808 ATGTCGGGGTTTCTTAATTCTTCTCTGAACGGATCTGCTTCCAATCTTCAAGATAGTGCTGGACGGTCTTTTGCCACATCTTTCTCTAGTCAGTCTGGTGCAGCTTCCCCAATTTTTCATCACACTGGAGCTATTCAAGGGTTGCACAATATTCATGGGAGCTTTAATGTTCCCAACATGCCTGGTACTCTCACACCAAGAAACTCCACAATAAACAATATTCCATCTGGGGGTGTTCAACAACAAGCAGGAAACCTTTCTAGTGGAAGATTTGCATCCAACAATCTCCCTGTCGCATTATCACAGCTATCCCATGGAAGTTCCCATGGACATTCAGGAGTCACCAATAGAGGAGGTACAAGCGTTGTAGGAAACCCTGGATTTAATAGTGGCACAAATGGAGTTGGTGGTTCCATTCCTGGGTTTCCTGCATCTATTGGTAATCGAAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTTCTCGAATCACTAGCTCTGTGGGAAACATGATTGGAGGGGGGAATATTGGAAGGACTGGTGGAGGATTGTCTGTGCCTGGTCTTGGTTCTCGTCTAAATTTTGGTGGAAACAGTGGATCAGGTGCTTTAGGCATGCAAGGACAGAATCGATTGATGAGTAGTGTACTTCCACAAGGATCTCCTCAGGGGATTTCAATGCAAGGGAATTCTTATCCTAGTGCTGGAGGCGCACTTTCCCAAAGCCATATTCATGCCGTAAATAACATGAACACTATGAGGATGTTCAATGATGTAAATTCCAATGATAGTTCACCTTTTGATCTCAATGACTTCCCTCAACTGTCAAGTCGTCCTAGTTCTGCTGGAGGATCTCAAGGGCAGTTGGGTTCTTTACGGAATCAGGGTCTTGGCATTAGTCCCATTGGTCAACAGAACCATGAGTTTAGTATTCAAAATGAAGATTTCCCTGCATTGCCGGGATTCAAAGGTGGTAATGCAGATTATGATATGGATATGCACCAGAAAGAGCAACTTCATGACAATGCTTCATCAATGATGCAATCTCAGCATTTCTCTCAGATGGGGAGGTCTGCTGGTTTCAGCTTGGGGGGGACATATTCATCCCATCGTACCCAACCGCAACAACACAATCCTTCAGTCAGCAGTGGCGGTGTCTCGTTCTCATCTGTAAATAACCAGGATCTTCTCCATCAACATGGATCGGATATTTTTCCATCTCATTCTGCCTATCAGTCACAGACCAGCGGACCTCCTGGCATTGGATTAAGGCCTTCAAATTCTCCAAATGCAGTTTCTGGTATGGGTTCATATGACCCGCTCATCCAGCAATATCAACAGCAAAAGAACCAATCCCAGTTTCGTCTTCAAATGCCATCTCTAAATCAGTCTTTTAGGGATCAGAGCATGAAGTCTATGCAAGCTGCACAATCTACACCAGATCCATATGGTTTGCTTGGCCTGTTAAGTGTAATCAGGATGAATGATCTTGACCTGGCATCTCTTGCTCTTGGAATTGATCTTACAACCCTTGGCTTAAATTTGAATTCATCAGAAAATCTTCACAAGACTTTTAAGTCTCCATGGTCAGAAGAATCAGCTAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTTCACTGAACAACCACCTGCTCTTCACCAAGGTTATTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGACAAAGCACAATTATATGCTGCAAACGAGCTTAACAACAGAGGTTGGTGGTACCACAAAGAGTATCGATTGTGGTTTAAGAGAGCACCCAACATGGAGCTGCTGGTGCAAACAAGCACATACGAAAGAGGAACTTTTCACTGTTTTGATCCAAGCTCATTTGAAACGGTCCGCAAGGATAATGTTGTTCTTTCGTATGATATGCTGGAAAATAGACATCTTCTACCTCAACATTAA 1977 0.433 MSGFLNSSLNGSASNLQDSAGRSFATSFSSQSGAASPIFHHTGAIQGLHNIHGSFNVPNMPGTLTPRNSTINNIPSGGVQQQAGNLSSGRFASNNLPVALSQLSHGSSHGHSGVTNRGGTSVVGNPGFNSGTNGVGGSIPGFPASIGNRNAVPGLGVSPILGNAGSRITSSVGNMIGGGNIGRTGGGLSVPGLGSRLNFGGNSGSGALGMQGQNRLMSSVLPQGSPQGISMQGNSYPSAGGALSQSHIHAVNNMNTMRMFNDVNSNDSSPFDLNDFPQLSSRPSSAGGSQGQLGSLRNQGLGISPIGQQNHEFSIQNEDFPALPGFKGGNADYDMDMHQKEQLHDNASSMMQSQHFSQMGRSAGFSLGGTYSSHRTQPQQHNPSVSSGGVSFSSVNNQDLLHQHGSDIFPSHSAYQSQTSGPPGIGLRPSNSPNAVSGMGSYDPLIQQYQQQKNQSQFRLQMPSLNQSFRDQSMKSMQAAQSTPDPYGLLGLLSVIRMNDLDLASLALGIDLTTLGLNLNSSENLHKTFKSPWSEESAKGDPEFNVPQCYFTEQPPALHQGYFSKFSVETLFYIFYSMPKDKAQLYAANELNNRGWWYHKEYRLWFKRAPNMELLVQTSTYERGTFHCFDPSSFETVRKDNVVLSYDMLENRHLLPQH* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1808 658 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 658 - -
Mtr4g1808 658 Gene3D - 477 658 IPR038635 -
Mtr4g1808 658 MobiDBLite consensus disorder prediction 59 90 - -
Mtr4g1808 658 Pfam NOT2 / NOT3 / NOT5 family 527 649 IPR007282 GO:0006355
Mtr4g1808 658 MobiDBLite consensus disorder prediction 103 129 - -
Mtr4g1808 658 MobiDBLite consensus disorder prediction 268 306 - -
Mtr4g1808 658 MobiDBLite consensus disorder prediction 365 441 - -
Mtr4g1808 658 PANTHER CCR4 NOT-RELATED 2 658 IPR040168 GO:0030015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1808 Mtr-Chr4 31121835 31129539 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1808 K12605 - gmx:100807026 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1808 4 31121835 31129539 Mtr4g1808 4 31121835 31129539 ECH