Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1782 ATGGCATCATCACGAATCATCTCCCATTCTCCGCCCAATCTCCACCGTCAATCTTCCCCTTCCGACTCCCTTAAACCCATCCCCACCGTCAATCTCACTTTTCCCCCAAAACGACACCGTAACCTCTGCATTCGCGCTTCTCAAAACGACACATCACACTCCGTTGAACTGCAAACCAGCCCAAACGGCGTCGTTTCCAAAGATCCAATCGCTCTTCCGAGGCCTTTGTCTTCTAATCAGTTACATACCGCTGTTTCCGATGGTTCACGTCTTCGTGTTGCTTATCAGGGGGTTCAAGGTGCTTACAGTGAATCTGCTGCACGAAAGGCTTACCCTAATTGTGAAGCTGTGCCTTGTGAACAATTTGACACCGCTTTTGAAGCTGTAGAAAGATGGCTTGTGGACAGAGCAGTTTTGCCCATTGAGAATTCATTGGGAGGTAGCATCCACAGAAATTACGACCTTCTACTCAGGCACCAGTTACATATAGTAGGAGAAGTAAAATATGCAGTACATCATTGTTTGATGGCCAACCATGGTGTTAAGCTTCAGGATTTGAAGCGTGTTCTTAGTCATCCACAGGCTCTTGCACAATGTGAGAACACCTTGACGGGGTTTGGCTTAGTCAGAGAAGCGGTTGATGATACAGCCGGTGCTGCAAAGCATGTTGCCCACAAAAAACTACAAGATGCAGGAGCTGTTGCTAGCTCTGCTGCTGCAGAGATCTATGGCTTAAGTATACTTGCTCAAGACATTCAGGATGATAGTGATAATATCACCCGATTTTTAGTATTGGCGCGAGAACCGATACTTCCAGGCACAGACAGGCCATTCAAGACAAGCATAGTTTTTTCTTTAGAAGAGGGTCCCGGGGTGCTTTTCAAGGCCCTTGCTGTTTTTGCCCTGCGTCAAATTAATCTTTCAAAGATTGAAAGTCGTCCTTTGCGAAAGCAACCTCTACGAACATCTGATGATAACAACAATAGGTACTTTGATTATCTTTTCTATGTTGATTTTGAAGCCTCAATGGCTGATCAGAATGCACAAAATGCCTTAAGGCATCTAAAGGAGTTTGCTACATTCTTGCGAGTGCTGGGGAGTTATCCTATGGACACTAGCACGGCATAA 1128 0.4557 MASSRIISHSPPNLHRQSSPSDSLKPIPTVNLTFPPKRHRNLCIRASQNDTSHSVELQTSPNGVVSKDPIALPRPLSSNQLHTAVSDGSRLRVAYQGVQGAYSESAARKAYPNCEAVPCEQFDTAFEAVERWLVDRAVLPIENSLGGSIHRNYDLLLRHQLHIVGEVKYAVHHCLMANHGVKLQDLKRVLSHPQALAQCENTLTGFGLVREAVDDTAGAAKHVAHKKLQDAGAVASSAAAEIYGLSILAQDIQDDSDNITRFLVLAREPILPGTDRPFKTSIVFSLEEGPGVLFKALAVFALRQINLSKIESRPLRKQPLRTSDDNNNRYFDYLFYVDFEASMADQNAQNALRHLKEFATFLRVLGSYPMDTSTA* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1782 375 ProSiteProfiles Prephenate dehydratase domain profile. 92 267 IPR001086 GO:0004664|GO:0009094
Mtr4g1782 375 CDD ACT_CM-PDT 279 369 - -
Mtr4g1782 375 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g1782 375 Gene3D - 176 255 - -
Mtr4g1782 375 Gene3D - 87 175 - -
Mtr4g1782 375 SUPERFAMILY Periplasmic binding protein-like II 92 273 - -
Mtr4g1782 375 CDD PBP2_Ct-PDT_like 92 269 - -
Mtr4g1782 375 ProSitePatterns Prephenate dehydratase signature 2. 307 314 IPR018528 GO:0004664|GO:0009094
Mtr4g1782 375 Gene3D - 274 372 - -
Mtr4g1782 375 Pfam Prephenate dehydratase 93 269 IPR001086 GO:0004664|GO:0009094
Mtr4g1782 375 ProSitePatterns Prephenate dehydratase signature 1. 243 265 IPR018528 GO:0004664|GO:0009094
Mtr4g1782 375 ProSiteProfiles ACT domain profile. 281 369 IPR002912 -
Mtr4g1782 375 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 16 373 - -
Mtr4g1782 375 PANTHER AROGENATE DEHYDRATASE 16 373 - -
Mtr4g1782 375 SUPERFAMILY ACT-like 262 370 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1782 Mtr-Chr4 30739769 30744370 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1782 K05359 - gmx:100787759 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1782 4 30739769 30744370 Mtr4g1782 4 30739769 30744370 ECH