Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1777 ATGAGAACAAGTAACCACTTAATTGGTGTACTTAACTTCTTAACCTTCTTACTATCAATCCCCATCCTAGGAGGTGGAATATGGCTAAGCAGTAGAGCAAACAACACAGACTGTCTCAAATTTCTTCAATGGCCATTAATCATAATAGGAGTTTCCATCATGGTTGTTTCGCTAGCCGGTTTTGCAGGGGCGTGTTACCGTAACACTTTCTTGTTACGTTTTTATCTTGTTGTCATGTTCTTTGTCATTGGTGTGCTTATTGGATTTATAATATTTGCATATGTTGTAACGGATAAAGGGTCTGGAAGAAGGGTTATGAATAGAGGGTATTTGGATTATTATTTGGAGGATTATTCTGGTTGGTTGGAAGAGAGAGTGGCTAGTGATGAGTATTGGGGGAAGATTAGTTCTTGTATAAGGGATTCTAAAGCTTGTAGGAAGTTGGCTAGAAATTTTAATGATGTTCCTGAGACTGCTGATATGTTCTTTGAAAGAAAACTCAATCCTATTCAGTCTGGTTGTTGCAAACCTCCAACAGATTGTGGCTATTTGTATCAAAACGAGACAGTATGGATTCAAGGAGCAGGACTAGTGGGAACAAACCCTGACTGCAACAAATGGAACAATGACCAACAACAACTTTGTTATGACTGTGATTCTTGCAAAGCTGGTGTACTTGGTAGTCTCAAGAAGAGTTGGAGGAAAGTATCAGTGATCAATATTGTTGTTATGATCATCCTTGTAATTGTTTACATAGTTGCTTATTATGCTTATAGAAACAACAAAAAGATGGATAATGATGAACCTTATGGTGAAGCAAGGATGACAAAGTCACAACCTAGTGCTTTTCATCTTTAA 858 0.3753 MRTSNHLIGVLNFLTFLLSIPILGGGIWLSSRANNTDCLKFLQWPLIIIGVSIMVVSLAGFAGACYRNTFLLRFYLVVMFFVIGVLIGFIIFAYVVTDKGSGRRVMNRGYLDYYLEDYSGWLEERVASDEYWGKISSCIRDSKACRKLARNFNDVPETADMFFERKLNPIQSGCCKPPTDCGYLYQNETVWIQGAGLVGTNPDCNKWNNDQQQLCYDCDSCKAGVLGSLKKSWRKVSVINIVVMIILVIVYIVAYYAYRNNKKMDNDEPYGEARMTKSQPSAFHL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1777 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Mtr4g1777 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
Mtr4g1777 285 PRINTS Transmembrane four family signature 6 29 - -
Mtr4g1777 285 PRINTS Transmembrane four family signature 39 65 - -
Mtr4g1777 285 PRINTS Transmembrane four family signature 66 94 - -
Mtr4g1777 285 Pfam Tetraspanin family 6 254 IPR018499 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1777 Mtr-Chr4 30654148 30658938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1777 1 276 Miscellaneous Gene Families AT5G60220 73.188 8.23e-132 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1777 - - gmx:100788977 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1777 4 30654148 30658938 Mtr4g1777 4 30654148 30658938 ECH