Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1762 ATGATTAGAACAAGAATCAACACAGCACGCACCATTTTCTCAACTGTTTTTAGAACCAATTCTTCTCATTCTCACTATGCTTCTGCTGCTGCTTTTTCCACCACCTCCTTCCTCTTCGATGACACTCAGATACAGTTTAAAGAGAGTGTTGCTCAATTTGCAACTGAAAATATTGCCCCTCATGCTTCCAACATTGATCACACAAATTATTTCCCAAAGGAGGTTAACTTGTGGAAAAGTATGGGAGAATTTAATCTCCATGGGATTACTGCACCAGAGGAGTATGGAGGGCTTGGTCTAGGTTACTTGTATCATTGTATAGCAATGGAAGAGATTAGCCGTGCTTCAGGATCTGTTGGTCTTTCTTATGGTGCTCATTCTAACCTATGTATCAATCAACTGGTGAGGAATGGAAGCCATGAACAGAAACAGAAATACTTGCCAAAGCTCATCTCTGGGGATCATGTGGGAGCTTTGGCAATGAGTGAACCAAATTCTGGATCTGATGTTGTCAGCATGAAATGTAAGGCTGATCGTGTAGACGGGGGATATGTACTTAACGGGAACAAGATGTGGTGTACTAATGGGCCAACTGCTCAAACATTAGTTGTCTATGCAAAAACAGACGCAACAGCAGGGTCAAAAGGAATCACTGCATTTATCATCGAGAAGGGAATGCCTGGATTCAGTACTGCCCAGAAATTGGATAAACTAGGGATGCGAGGAAGTGATACATGTGAGCTAGTCTTTGAGAATTGCTTTGTTCCAGAGGAAAATGTTCTTGGGAAAGAAGGGAAAGGAGTCTATGTCATGATGTCTGGGCTGGATTTGGAAAGGCTTGTTTTAGCAGCCGGTCCCCTTGGTATTATGCAGTCATGTCTTGATGTTGTCCTTCCTTATGTTCGACAAAGAGAGCAGTTTGGTCGTCCTATTGGGGAGTTTCAGTTTATACAGGGGAAAGTTGCTGACATGTATACATCTTTACAGTCTTCAAGGTCTTATGTGTATTCTGTAGCTCGGGACTGTGACAACGGAAAAGTTGACCCAAAGGATTGTGCTGGAGTTATACTTTGTGCAGCTGAAAGAGCAACACAAGTTGCTTTGCAGGCGATACAATGTTTAGGTGGAAACGGCTATGTCAACGAGTATCCAACCGGTCGTCTCCTTAGAGATGCGAAACTCTACGAGATCGGGGCCGGAACAAGTGAGATCAGAAGAATGATTATTGGACGCGATCTCTTCAAGGAGCAATGA 1254 0.4322 MIRTRINTARTIFSTVFRTNSSHSHYASAAAFSTTSFLFDDTQIQFKESVAQFATENIAPHASNIDHTNYFPKEVNLWKSMGEFNLHGITAPEEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRNGSHEQKQKYLPKLISGDHVGALAMSEPNSGSDVVSMKCKADRVDGGYVLNGNKMWCTNGPTAQTLVVYAKTDATAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGKEGKGVYVMMSGLDLERLVLAAGPLGIMQSCLDVVLPYVRQREQFGRPIGEFQFIQGKVADMYTSLQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVALQAIQCLGGNGYVNEYPTGRLLRDAKLYEIGAGTSEIRRMIIGRDLFKEQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1762 417 Gene3D - 30 155 IPR037069 GO:0016627|GO:0050660
Mtr4g1762 417 ProSitePatterns Acyl-CoA dehydrogenases signature 2. 372 391 IPR006089 GO:0003995
Mtr4g1762 417 PANTHER 2-METHYLACYL-COA DEHYDROGENASE, MITOCHONDRIAL 10 417 - -
Mtr4g1762 417 Pfam Acyl-CoA dehydrogenase, middle domain 158 253 IPR006091 GO:0016627
Mtr4g1762 417 Pfam Acyl-CoA dehydrogenase, C-terminal domain 265 413 IPR009075 GO:0016627
Mtr4g1762 417 Pfam Acyl-CoA dehydrogenase, N-terminal domain 41 154 IPR013786 GO:0016627|GO:0050660
Mtr4g1762 417 PIRSF PIGM 21 131 - -
Mtr4g1762 417 PIRSF PIGM 166 417 - -
Mtr4g1762 417 ProSitePatterns Acyl-CoA dehydrogenases signature 1. 160 172 IPR006089 GO:0003995
Mtr4g1762 417 PANTHER ACYL-COA DEHYDROGENASE 10 417 - -
Mtr4g1762 417 CDD IVD 39 415 IPR034183 GO:0003995
Mtr4g1762 417 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 263 415 IPR036250 GO:0016627
Mtr4g1762 417 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 33 276 IPR009100 GO:0016627
Mtr4g1762 417 Gene3D - 270 414 - -
Mtr4g1762 417 Gene3D - 157 269 IPR046373 GO:0016627
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1762 Mtr-Chr4 30449936 30455998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1762 40 417 Acyl Lipid Metabolism Gene Families AT3G45300 88.889 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1762 K00253 - gmx:100794259 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1762 4 30449936 30455998 Mtr4g1762 4 30449936 30455998 ECH