Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1754 ATGATTAGAAATCAATCTCTCTTGTCCTTCTCACTTGCACTACTAGTTTCTCTCTTGTATTCAACCACCACTAGTTTATCTCAACTATCACCTGCTACTGCTCCTATACAACCTACACTACCAGCTCCAACCACACCTGCTGCAGCTCCTAAACCATTGGTACCTTCATTACCAGAGTCACCTAGTGATTCCACCCCTGACACCGCAGGCACTGTTGACATCGTCGGAATCCTGAGAAAGGCGAAGGCATACAATGTCTTCATTCGACTCATGAAAACAACTCAATTGATCAACCAACTCAATTCACAACTACTGGCTACAAAAACAGGTGGATTAACAATACTTGCACCAGATGACAGCGCTTTTTCAGGACTCAAAGCGGGATTCCTAAACTCTCTTTCCGATGGACAAAAGCTCGAGTTGTTACAGTTCCATGTTATTTCAGACTATGTATCTAGCTCTAACTTCGATACTCTAACCAACCCTGTGAGAACACTTGCTGGAGATAAACCCGGAAAGGTGGAACTTAATGTTGTGAGTTACGGAGGAAGTGTGAACATATCGACAGGGGAAGTGAACACGACAATCAATGGCATTATATATACCGATAAACGTCTTGCTATTTACAAAGTTGGCAAAGTGCTTCTTCCTATGGATTTCTTTTCCGTTGCTAAGGCACCGGGGAAGGCACCATCTTTGGCACCAGAACCTTCAACCGATACAGCAAAGGCACCTAAACCCGATAAAGATACATCATCAGATTCGTCGCAGGTGATTAATCCAACTGTAAACAAGTCTGGCTCTATCAAGATTGTGTATGGAAAGTGGATGTCAGTTGGACTTGTATTACCTTTCGCGGCGATGATTCAAATTTGA 876 0.4315 MIRNQSLLSFSLALLVSLLYSTTTSLSQLSPATAPIQPTLPAPTTPAAAPKPLVPSLPESPSDSTPDTAGTVDIVGILRKAKAYNVFIRLMKTTQLINQLNSQLLATKTGGLTILAPDDSAFSGLKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGDKPGKVELNVVSYGGSVNISTGEVNTTINGIIYTDKRLAIYKVGKVLLPMDFFSVAKAPGKAPSLAPEPSTDTAKAPKPDKDTSSDSSQVINPTVNKSGSIKIVYGKWMSVGLVLPFAAMIQI* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1754 291 MobiDBLite consensus disorder prediction 229 261 - -
Mtr4g1754 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 289 - -
Mtr4g1754 291 Pfam Fasciclin domain 84 217 IPR000782 -
Mtr4g1754 291 Gene3D FAS1 domain 54 217 IPR036378 -
Mtr4g1754 291 MobiDBLite consensus disorder prediction 37 68 - -
Mtr4g1754 291 SUPERFAMILY FAS1 domain 70 218 IPR036378 -
Mtr4g1754 291 SMART fasc_3 113 218 IPR000782 -
Mtr4g1754 291 MobiDBLite consensus disorder prediction 37 59 - -
Mtr4g1754 291 ProSiteProfiles FAS1/BIgH3 domain profile. 71 206 IPR000782 -
Mtr4g1754 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 289 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1754 Mtr-Chr4 30268676 30269829 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1754 - - gmx:100819833 380.563