Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1747 ATGGCAGGAGGAAAGTGGAGCATCTTGGTGGCCTTATTTATCTTACTTATCTCTATGGAAGCTGCCATTGCTCAAGGCCAAGGAAATGGTAATGGCAACGGTAACAATGGCAACGGTAAGGGAAATGGTAATGGTAATGGTAACAATGGCAATGGTAAGGGAAATGATAAGGAAGAAGGCAAGGAGAAAGGAAAAGAAAAGGAGAAAGCTCCAAAAAAGAAGAAGGCTCCAAAAGAGGAATCCTCAAACTATCAACAGTTACAAACTTTGCCCTCAGGACAGGAGCGAGCATTCTGCAAAGCAAACAATACCTGTCATTTCGCGACCCTTGTGTGTCCAGCAGAGTGCAAAACCAGGAAGCCAAAGAAGAACAAGAAGGATAAAGGTTGTTTCATTGACTGCAGCAGCAAATGTGAAGCCACTTGCAAGTTTAGAAGAGCAAACTGTGATGGTTACGGATCATTGTGCTACGATCCTCGCTTTGTTGGTGGAGACGGTGTGATGTTCTACTTCCACGGAGCCAAAGGAGGAAACTTTGCCATAGTTTCAGACGACGAATTCCAAATCAATGCACACTTCATCGGTACTCGGCCTCAGGGAAGGACTCGCGACTACACATGGGTGCAAGCACTTTCTCTCATGTTCGACACACACACTCTTGTTATTGCAGCCAATAGAGTAACTCAATGGAATGACAATGTTGACTCTCTTACAGTAAAATGGGATGGTGAATCAGTAATCATTCCTACCGATGACGACGCTGAATGGAAGACTAATGGTGATGAAAGAGAAGTGGTTGTGGAGAGAACAGACGATGCAAACAGTGTTAGAGTCACAGTTTCTGGTTTGCTTGAAATGGACATAAGGGTAAGGCCTATTGGAGAAAAAGAAAACAAGGCTCACAATTACCAATTACCATCAGATGATGCTTTTGCTCATTTGGAGACACAATTCAAGTTTAAAAATCCTACAGATTCTATTGAAGGAGTTTTAGGTCAAACTTATAGGCCAAGTTATGTTAGTCCTGTCAAGAGAGGTGTTGCTATGCCAATGATGGGAGGAGAAGACAAGTACCAAACTCCATCTCTTTTTTCAACAACATGCAAACTATGCAGGTTTCAGAGGCCTTCCACTAGCCAAGGACTCATTGCTCAATATTGA 1161 0.4298 MAGGKWSILVALFILLISMEAAIAQGQGNGNGNGNNGNGKGNGNGNGNNGNGKGNDKEEGKEKGKEKEKAPKKKKAPKEESSNYQQLQTLPSGQERAFCKANNTCHFATLVCPAECKTRKPKKNKKDKGCFIDCSSKCEATCKFRRANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDEFQINAHFIGTRPQGRTRDYTWVQALSLMFDTHTLVIAANRVTQWNDNVDSLTVKWDGESVIIPTDDDAEWKTNGDEREVVVERTDDANSVRVTVSGLLEMDIRVRPIGEKENKAHNYQLPSDDAFAHLETQFKFKNPTDSIEGVLGQTYRPSYVSPVKRGVAMPMMGGEDKYQTPSLFSTTCKLCRFQRPSTSQGLIAQY* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1747 386 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 382 - -
Mtr4g1747 386 MobiDBLite consensus disorder prediction 33 89 - -
Mtr4g1747 386 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 382 - -
Mtr4g1747 386 MobiDBLite consensus disorder prediction 54 80 - -
Mtr4g1747 386 MobiDBLite consensus disorder prediction 33 53 - -
Mtr4g1747 386 Pfam Root cap 317 373 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1747 Mtr-Chr4 30201747 30203743 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1747 - - lja:Lj3g3v3086010.1 548.895