Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1743 ATGATGAACATATCCAATTCCATACAACAAGGACGGTTTCTAGTCAACACTTCCTTCTTACGAGGGGTGTGTAAGTTGGCGTGTGTTCGAAGTTTGCCGCAGAATCAAAATCAAAGAATTAGAAGGGGTTTTTCCAAAAACATGGCTTGGAGTATGGAAAGATGTGACTTGGGTCTTGATGTTAAGACTGGTGTGGTTCATCCAGCAACAGATGCTTATGCTGCAGAGGCAGTTGAAACTTTGAAAGCTGGGAAGGTCATTGCAGTTCCCACTGATACATTGTATGGATTTGCTTGTGATGCTTGCTCATTGGAAGCGGTTAACAGGATTTATGAGATTAAAGGTCGTAAACATACAAGCCCACTAGCTATTTGTGTTGGGGATGTATCAGACATAAATCGCTTTGCCCTCACTGATCATTTACCTCATGGTTTGCTTGATTCCCTACTACCAGGGCCTGTCACAGTTGTACTAAGTCGAGGTGAGTCAAGTGCTCTTGAACGATCTCTGAACCCAGGATTCGATAGTATAGGAGTTAGAGTGCCAGATTGCAATTTCATTAGGCTCATTGCCCGTGGTTCAGGAACTGCTTTGGCCCTTACCAGTGCAAACCTAAGTGGACAACCAAGTAGTGTTTGCATCAAAGATTTTGAAAAACTATGGGAGCATTGTGCTTCTGTTTATGATGGTGGTTTGCTTCCATCCGGTCGTGCAGGTTCAACTGTAGTGGATCTCAGTACACCATACAAATACAAGATACTTAGACCTGGAAGCGCGAAGGAAGAGACAGTTGCCATCTTGGAGAAGCATGCTTTTGTTGAGGAAGTGTGA 831 0.4368 MMNISNSIQQGRFLVNTSFLRGVCKLACVRSLPQNQNQRIRRGFSKNMAWSMERCDLGLDVKTGVVHPATDAYAAEAVETLKAGKVIAVPTDTLYGFACDACSLEAVNRIYEIKGRKHTSPLAICVGDVSDINRFALTDHLPHGLLDSLLPGPVTVVLSRGESSALERSLNPGFDSIGVRVPDCNFIRLIARGSGTALALTSANLSGQPSSVCIKDFEKLWEHCASVYDGGLLPSGRAGSTVVDLSTPYKYKILRPGSAKEETVAILEKHAFVEEV* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1743 276 SUPERFAMILY YrdC/RibB 74 263 IPR017945 -
Mtr4g1743 276 Gene3D DHBP synthase 65 270 - -
Mtr4g1743 276 ProSiteProfiles YrdC-like domain profile. 71 259 IPR006070 GO:0003725
Mtr4g1743 276 PANTHER SUA5 35 275 - -
Mtr4g1743 276 Pfam Telomere recombination 80 257 IPR006070 GO:0003725
Mtr4g1743 276 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 35 275 - -
Mtr4g1743 276 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 74 264 IPR006070 GO:0003725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1743 K07566 - mtr:MTR_4g459430 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1743 4 30131690 30136788 Mtr4g1743 4 30131690 30136788 ECH