LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr4g1730	ATGTCATCATCATCTCAATCCACCGAACCGGTAACAGAAGAAAGAGATATAGATATTCGAACTTCAACCGAACCCGGTTCAAATACTGTCTGGGTTCGAACCGGTTCCGAGCAAGAAATGGATCTCCCTTCAAGCCCTAGTAGTAGCGGTTACGCCGGAGAAGGTGGAGGTAGCACTAGTGCCACCACCGGTTCCGCAATTGAGATCGAACATGATGATGAAATTGAAGAAGAAGAAGAACAATCGAGGATTCGGAATCAAATCGATGAAATTTCGATCACTGATTCTAATACTGATTGGATTCCTGGAAAACGACATCAAGATGAGGACGATGGTTCTATATCATGGAGAAAAAGGAAGAAGCATTTCTTTATTCTTAGCAATTCTGGCAAACCTATATATTCTAGGTATGGAGATGAACACAAGCTTGCAGGGTTTTCAGCTACTTTGCAAGCAATCGTTTCTTTTGTCGAGAATGGGGGTGACTCTATCAAATTGGTGAGAGCTGGAAAACATCAGGTGGTTTTTCTTGTGAAAGGACCAATTTACTTGGTTTGCATCAGCTCCACGGAAGAACCTTATGAGTCGTTAAGGGGGCAGTTGGAACTAATTTATGGACAGATCCTTGTTATATTAACAAAATCAATAAACAAATGTTTTGAGAAGAATTCGAAGTTTGATATGACACCCTTACTTGGTGGAACAGACACCGTCTTCTCTTCTTTGATTCACTCTTTCAGTTGGAACCCGGCTACATTTCTTCATGCCTATACTTGCCTTCCTCTTTCTTATGCAACGAGGCAAGCTGCTGGCGCTGTCTTACAAGACATTGCTGATTCTGGTGTTCTGTTTGCAACACTGATGTGCAGGCACAAGGTGATTAGTCTTGTTGGCGCTCAGAAAGCTTCCCTTCATCCAGATGATATGTTGCTGCTGGCCAATTTTGTCATGTCATCAGAATCCTTCAGGACGTCGGAATCATTTTCTCCAGTTTGCTTGCCAAGATACAATCCTTCAGCATTTTTGTATGCATATATCCACTATTTTGATGCGGACACATACTTGATGTTGCTAACCACTAATTCAGATGCATTTTATCATCTTAAGGATTGCCGGATTTGTATTGAAACGGTCCTTTTGAAGTCCAATGTCCTCAGTGAAGTTCAGAGATCCTTGCTAGACGGAGGAATGCATGTTGAAGATCTACCACCAATACCTCAGTCTGGAGCAGCTCATTTGGGTCAGCACATGCATCCATCAGATTCTCCTGAAAGATTTAAAGACCCTCATCATGGCATTGGGGGTCCTGCTGGGTTGTGGCATTTCATATACCGCAGTATATACCTGGATCAGTATGTCTCTTCAGAGTTTTCATCATCAATTAGTACTCGTCAACAGCAGAAAAGATTGTATAGAGCTTACCAGAAACTTTTTGCATCAATGCATGATAAAGGAATCGGACCACACAGAACTCAGTTTAGAAGAGATGAAAACTATGTTCTTTTATGTTGGGTGACACAGGATTTTGAGCTTTATGCTGCCTTTGATCCCCTTGCAGACAAGGCCTTGGCAATAAAGACATGCAACCGTGTTTGTCAATGGATAAAAGATGTGGAAAATGAAATATTTTTGCTAGGAGCTAGCCCCTTTTCATGGTGA	1659	0.4183	MSSSSQSTEPVTEERDIDIRTSTEPGSNTVWVRTGSEQEMDLPSSPSSSGYAGEGGGSTSATTGSAIEIEHDDEIEEEEEQSRIRNQIDEISITDSNTDWIPGKRHQDEDDGSISWRKRKKHFFILSNSGKPIYSRYGDEHKLAGFSATLQAIVSFVENGGDSIKLVRAGKHQVVFLVKGPIYLVCISSTEEPYESLRGQLELIYGQILVILTKSINKCFEKNSKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHAYTCLPLSYATRQAAGAVLQDIADSGVLFATLMCRHKVISLVGAQKASLHPDDMLLLANFVMSSESFRTSESFSPVCLPRYNPSAFLYAYIHYFDADTYLMLLTTNSDAFYHLKDCRICIETVLLKSNVLSEVQRSLLDGGMHVEDLPPIPQSGAAHLGQHMHPSDSPERFKDPHHGIGGPAGLWHFIYRSIYLDQYVSSEFSSSISTRQQQKRLYRAYQKLFASMHDKGIGPHRTQFRRDENYVLLCWVTQDFELYAAFDPLADKALAIKTCNRVCQWIKDVENEIFLLGASPFSW*	553

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	121	138	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	139	159	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	173	187	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	196	224	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	253	274	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	277	290	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	301	317	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	326	349	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	354	380	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	501	515	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	517	530	IPR004353	GO:0006623
	Mtr4g1730	552	PRINTS	Saccharomyces cerevisiae 73.5kDa hypothetical protein signature	530	550	IPR004353	GO:0006623
	Mtr4g1730	552	Pfam	Second Longin domain of FUZ, MON1 and HPS1	282	372	IPR043971	GO:0016192
	Mtr4g1730	552	PANTHER	SAND PROTEIN-RELATED	41	552	IPR004353	GO:0006623
	Mtr4g1730	552	PANTHER	BNAC04G15860D PROTEIN	41	552	-	-
	Mtr4g1730	552	MobiDBLite	consensus disorder prediction	22	66	-	-
	Mtr4g1730	552	Pfam	Third Longin domain of FUZ, MON1 and HPS1	438	539	IPR043970	GO:0016192
	Mtr4g1730	552	MobiDBLite	consensus disorder prediction	1	112	-	-
	Mtr4g1730	552	Pfam	First Longin domain of FUZ, MON1 and HPS1	121	242	IPR043972	GO:0016192

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr4g1730	Mtr-Chr4	29993733	30000851	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr4g1730	K20195		-	zju:107411372	840.491

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr4g1730	4	29993733	30000851	Mtr4g1730	4	29993733	30000851	ECH
	Mtr2g3245	2	46385059	46391391	Mtr4g1730	4	29993733	30000851	PCT