Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1718 ATGGAGGAAGAAAGTGAGATGAAAGAATCAAAGTTTAAGAGGATTTGTGTTTTTTGTGGTAGTAGTCCTGGTAACAAGAGTAGCTATAAAGATGCTGCTATTGAGCTTGGAAATGAGTTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGGTTGGTTTCTCAAGCTGTTTCTGATGGAGGTCGACATGTGATTGGGGTTATTCCAAGGACATTGATGCCAAGAGAGATCACTGGAGAGACAGTGGGAGAAGTGAAGGCAGTAGCAGGCATGCATCAAAGAAAAGCTGAGATGGCTAAGCATTCTGATGCTTTTATTGCCTTACCAGGTGGCTATGGGACACTTGAGGAACTTCTTGAGGTCATAACTTGGGCTCAGCTTGGCATCCATGATAAACCAGTGGGGTTGTTGAATGTAGATGGCTACTACAATTCTTTGTTATCTTTCATTGACAAAGCTGTGGAGGAAGGCTTCATTAGCCCTAAAGCTCGTCATATAATTGTATCTGCACCATCAACAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCTCCACAACATGAAAGAGTTGCATCTAAGCAAAGTTGGGAAACTGGGAAGCTGGATTAG 630 0.4206 MEEESEMKESKFKRICVFCGSSPGNKSSYKDAAIELGNELVSRNIDLVYGGGSIGLMGLVSQAVSDGGRHVIGVIPRTLMPREITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSTKELVKKMEEYSPQHERVASKQSWETGKLD* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1718 209 Pfam Possible lysine decarboxylase 57 187 IPR031100 -
Mtr4g1718 209 Gene3D - 2 189 - -
Mtr4g1718 209 MobiDBLite consensus disorder prediction 188 209 - -
Mtr4g1718 209 PANTHER LOG FAMILY PROTEIN YJL055W 1 208 - -
Mtr4g1718 209 SUPERFAMILY MCP/YpsA-like 12 190 - -
Mtr4g1718 209 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 1 208 - -
Mtr4g1718 209 TIGRFAM TIGR00730: TIGR00730 family protein 13 190 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1718 Mtr-Chr4 29857807 29863066 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1718 K22522 - gmx:100815735 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1718 4 29857807 29863066 Mtr4g1718 4 29857807 29863066 ECH
Mtr2g3257 2 46567585 46573060 Mtr4g1718 4 29857807 29863066 PCT