Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1716 ATGGCCGGTAAAAGTGGAACGACTCCGGCGACATACTCACCGTCTCTGACAACCGGTAAAAAGAAACCACTGCTTCTCAAGGAAGAAGATTGGACCCGACCCGATGGCCGTGGTTTCCACCAGTGTAGACCCGCTTTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCTGCTTATGCTGAGTTTGGAAATACCAAAGTCATTGTATCTGTGTTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTACAGTGATACAGGGCGTCTGAATTGCAATGTCAGCTATACAACGTTTTCAACTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAATACAGTTCGATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGATTCTTTTCCCAAGACCACTGTGGATGTTTTTGCATTGGTGCTGGAATCTAGTGGCAGTGATCTCCCAGTTGTCATATCGGTTGCTAGTCTTGCCTTGGCAGATGCCGGAATACTGATGTATGACCTTGTTGCCTCAGTTTCAGTGTCATGTCTCGGCAAGAACCTCGTCATTGATCCTATATTTGAGGAGGAAAACTCCCAAGATGGAAGCTTAATGATTACTTGCATGCCATCTCGCTATGAAATTACCCAACTGACAGTTACCGGCGAATGGTCCACCCCAAAGATTAATGAGGGAATGCAGCTGTGCTTGGATGCTTGTGCAAAGCTTGCTAAGATTATGAGGTCATGTTTGAAAGAATCTGCTTCTGATGCACAGGATGAAAGCTCTTAG 777 0.4595 MAGKSGTTPATYSPSLTTGKKKPLLLKEEDWTRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFSTPVRGQGSDHKEYSSMLHKALEGAIILDSFPKTTVDVFALVLESSGSDLPVVISVASLALADAGILMYDLVASVSVSCLGKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRSCLKESASDAQDESS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1716 258 PANTHER EXOSOME COMPLEX COMPONENT 8 250 - -
Mtr4g1716 258 Pfam 3' exoribonuclease family, domain 1 41 165 IPR001247 -
Mtr4g1716 258 CDD RNase_PH_MTR3 42 248 - -
Mtr4g1716 258 Gene3D - 24 257 IPR027408 -
Mtr4g1716 258 SUPERFAMILY Ribonuclease PH domain 2-like 167 252 IPR036345 -
Mtr4g1716 258 Pfam 3' exoribonuclease family, domain 2 169 229 IPR015847 -
Mtr4g1716 258 PANTHER EXOSOME COMPLEX COMPONENT MTR3 8 250 - -
Mtr4g1716 258 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 192 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1716 Mtr-Chr4 29838372 29844340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1716 K12587 - gmx:100816271 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1716 4 29838372 29844340 Mtr4g1716 4 29838372 29844340 ECH