Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1708 ATGCAAGTTGCTTTGATACAACAAAAGTATGAAAAAGCTTTGAAGGGTGAGGGTGAGTTGTTGGTCATCATGTCAGAAGCGGAGAAGACCGAGATGGTGGACAAGGCAAGAAATGTTATTGTCTTGTGCCCTAGTGATAAAGTTTTAAGGGATGTAACAGAGGAACATATTGTGGCATCATTGTGGTCAAAGTTGGAGTCGTTGTATGTGACAAATTCTTTGGCTCATACACAATTCCTAAAACTACATCTCTACTCGTTTAAGATGGTGGAGTCAAAGGTTGTCTTGGAGCAACTAATGGAGTTCAAACAAATTCTTGATGATTTGGAGAACATTGAGGGTACCATGCTCTATGGTAAAGAAGGCACTGCCACCTTGAAGGACGTCCAAGCGGATTTGAGAACCAAGGAGTTAACTAAGTCCAAGGACTTGATAGATGATGAAAATAGTGAAGGTCTAAATGATGAAAGTGAGTTTAATTATGATGAAGATAGTGATCAAGGACCACATAATAGGGGAGACATTAAACCCGAATGGTTTAGGTGCAAAAATGGAACAATGCAATCGCCAATTGATTTGTTGAATCATAGGGTTCAAATTGTGTCCAATTTAGGAGGACTTCAGATCAACTACACTCCCTCTAATGCAACTCTTAAAAATAGGGGTCATGATATCAGGCTGGAATTGATTGCAAACTCAAGCTATCTACAAATTAATGGAACTCAGTATGTACTTAAACAGTTACATTGGCATTCTCCCTCTGAACACACCATAGATGGCAAAAGGTTGGATCTAGAGTTACATTTGGTACATGAAACTCCATCAGGAGAAACGGCAGTGATTGGAATATTGTACAAAACAGGATTACCAGATCTTTTCTTGTCATTGTTGAGAAAAGACTTAGAGGCAATTTCTACTAGTACAGGAGAAGAAAGAGCAGTTGGTGTAATTGATCCTAGGGTGATTCAATTCAACAAAATGCATTAG 987 0.388 MQVALIQQKYEKALKGEGELLVIMSEAEKTEMVDKARNVIVLCPSDKVLRDVTEEHIVASLWSKLESLYVTNSLAHTQFLKLHLYSFKMVESKVVLEQLMEFKQILDDLENIEGTMLYGKEGTATLKDVQADLRTKELTKSKDLIDDENSEGLNDESEFNYDEDSDQGPHNRGDIKPEWFRCKNGTMQSPIDLLNHRVQIVSNLGGLQINYTPSNATLKNRGHDIRLELIANSSYLQINGTQYVLKQLHWHSPSEHTIDGKRLDLELHLVHETPSGETAVIGILYKTGLPDLFLSLLRKDLEAISTSTGEERAVGVIDPRVIQFNKMH* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1708 328 MobiDBLite consensus disorder prediction 144 177 - -
Mtr4g1708 328 ProSiteProfiles Alpha-carbonic anhydrases profile. 157 328 IPR001148 -
Mtr4g1708 328 MobiDBLite consensus disorder prediction 163 177 - -
Mtr4g1708 328 SMART Carb_anhydrase_2a 159 326 IPR001148 -
Mtr4g1708 328 Gene3D Alpha carbonic anhydrase 155 328 IPR036398 -
Mtr4g1708 328 PANTHER CARBONIC ANHYDRASE 32 325 IPR023561 GO:0004089|GO:0008270
Mtr4g1708 328 Pfam gag-polypeptide of LTR copia-type 34 115 - -
Mtr4g1708 328 PANTHER BIFUNCTIONAL MONODEHYDROASCORBATE REDUCTASE AND CARBONIC ANHYDRASE NECTARIN-3 32 325 - -
Mtr4g1708 328 Pfam Eukaryotic-type carbonic anhydrase 180 274 IPR001148 -
Mtr4g1708 328 CDD alpha_CA_prokaryotic_like 168 320 IPR041891 -
Mtr4g1708 328 SUPERFAMILY Carbonic anhydrase 158 322 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1708 Mtr-Chr4 29715449 29718926 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1708 K01674 - gmx:100811978 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1708 4 29715449 29718926 Mtr4g1708 4 29715449 29718926 ECH