Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1701 ATGAACAAAAGAGATAGAATAAGGAAACATGGTTTTGTTGTTATAATATTTGTTGTATTTGTGGGGCCACAACTAGTTTCTTGTCAAAAAAGCAATGATGATGGTGATGTTGGTGGTTCAGGTGCTGGTATTGAGATATTTGCCCAGGAAATGTATAATAGCATGTCAGGTTTTACATCTGTTTTCAAGGGTGCAATCAAGAAAGAGTTGGGTTATTGCATACTTGATGTGGATGCTGATTGGGATGGTGCCTTCAATTTCACCAAAGATCTTACATTTTTGACCATATGTGCTCAAGAGATGAAAGGAGATATTACACAAAGAATGTGCACAGCCGGAGAAATAGAAGCCTATGCCAGAAGTTTTGTTTCGGGGGACAAGTCTGCAGGGTCTGGAAAAGCCAAAGCAAACTTCTTGAAGCCTAACATAAACTGTAATTTGAGTTCCTGGGTTAATGGATGTGAACCTGGTTGGGGATGCAAAGCTAATCAGAAGGTTGATCTTGAGAGTAAGAAGAAGGAAATACCTGTTAGATCGGCTGATTGCCAACCTTGTTGCGAAGGGTTCTTTTGTCCTCGCGGCATTACTTGCATGATACCTTGTCCTTTGGGCGCATATTGTCCGCGTGGGGAACTGAATAAAACTAGTGGAATATGTCAACCATATCGTTATCAGTTACCTCCTGGAAAAGATAATCATAGTTGCGGAGGAGCCGATATTTGGGCAGACATTACAAGTAGTGGTGAGGTATTCTGTTCAGCAGGATCATACTGTCCATCTACAACCATAAAAAGTCCATGCAGTAGAGGGTCTTACTGCAGAAAAGGTTCTACAGCTCAAGAGAGATGTTTTAAGCTAGCAAGTTGTGAGCCTAAGTCAGCAAATCAAAACATTACTGCATATGGTCTCCTTGTTTTTGCCGGCTTATGTTTTATGCTGATTATCATATACAACTGTTCTGATCAAGTTCTTGCGACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCGCGCGAAAAATGGAAAACTGCAAAAGATATGGCTAAAAAGCACGCATCAGGACTACAATCACAATTATCGCGTACATTTTCTCGCAAAAAAACATCGAAGATGCCAGATTTCAAAGGTGTGTTACCACCTGTGGGAGCTGGTGCATCAAAAGCAAAGAAAAAGGATAAAAACAACCTCTCAAAAATAATAAATGATATTGAGCAAGATCCTGATAGTCAAGAAGGGTTCAATGTGCAAATAGGAGACAAAAATGTGAAAAAGCAAGCACCAAGGGGTAAGGCGTTGCATACTCAGAGTCAAATTTTCAAGTATGCATATGGTCAGATTGAAAAAGAAAAGGCGATGCAGGAACAAAATAAGAACTTAACATTCTCTGGGGTGATTTCAATGGCTAGTGACATTGATATAAGGAAAAGGCCTACAATTGAGGTTGCTTTTAAAGACTTGACACTCACTTTGAAAGGGAAAAACAAACATCTATTAAGATGTGTGACCGGTAAGTTACATCCCGGTCGAGTTTCTGCAGTCATGGGACCATCTGGGGCTGGTAAGACAACATTTCTTTCTGCTTTAACTGGAAAAGCAGCTGGTTGCTACACAACTGGTCAAGTTCTTGTAAATGGTCAGGAATCATCTATTCGATCCTTCAAGAGGATCATTGGCTTTGTTCCACAAGATGATATTGTCCATGGCAATTTGACAGTGGAGGAGAATCTATGGTTTAGTGCCAGATGCAGACTCTCGGCCGATCTACCGAAAGAAGAGAAAGTGTTAGTGGTTGAAAGAGTCATTGAATCCTTGGGTCTGCAGGCAATAAGGGATTCTTTGGTTGGGACAGTGGAGAGACGTGGAATCTCTGGAGGTCAAAGGAAGAGAGTAAACGTCGGACTAGAAATGGTTATGGAACCTTCCCTTCTAATTTTGGATGAACCTACATCCGGTTTGGACAGTTCATCTTCTCAGTTACTTCTTAGAGCACTTAGACGCGAGGCTCTTGAAGGAGTAAACATATGCATGGTCCTTCACCAACCGAGTTACACATTGTTCCGGATGTTTGATGATTTTATACTGCTAGCTAAAGGAGGTCTTACAGTGTATCATGGACCTGTGAACAAAGTAGAAGAATACTTCTCTGGCATCGGAATTGTTGTACCTGACCGTGTCAACCCTCCAGATTACTACATTGACATTTTAGAAGGAATAATAAAACCAAGTGCAGGCTCAGGAGTGACCCATAAACAACTACCAGTTAGATGGATGCTTCATAATGGATATTCTGTGCCTATGGATATGCTGCACCTAATCGAAGGAATGTCTGCTCAAACTGGTAATATTCCAACACAAGGAGCACCTAACCCTAATGCAAAGCTTACTGTCGCACCCTCTTTTGCTGGAGAACTTTGGCAGGATGTGAAATGCAACGTTGAGATGAAGAGAGACAACCTTCAACTCAACCTCTATAATTCAAACGATTTGTCCAATAGAAATACACCTGGATCTTTCACACAATATAGATACTTTCTTGGAAGAGCTGGTAAGCAGCGGTTGCGAGAAGCTAGAACACAAGCTGTAGATTTTCTGATTTTGCTGCTAGCTGGTGTTTGCTTAGGAACGCTTGCCAAAGTGAGTGATGAATCGTTTGGAGCAACCGGTTATACATACACCGTAATAGCAGTATCACTCCTTTCCAAGATTGCAGCTCTGAGATCATTCTCATTAGATAAGTTGCATTATTGGAGAGAAAGCGCTTCGGGTATGAGTAGCCTCGCTTACTTTCTCTCAAAGGATACGGTTGACCATTTCAGTACAATCATCAAACCTCTGGTTTACCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCATCTTTCACAGATAACTACATTGTTCTACTATGTTTGGTATATTGTGTCACTGGCATAGCTTATGTGTTGGCAATCTTTCTTCAACCAGGTCCAGCCCAGCTGTGGTCAGTGTTACTACCGGTAGTTTTGACTCTCCTAGCAACTTATGATAATGAAGAGGATAGCAAATATGTGAAATTTCTATCTGACTTGTGCTACACCAAGTGGTCTCTTGAAGCATTTGTTATATCAAATGCCAAGAGATATTCCGGAGTTTGGTTAATAAGCCGATGTGGTGCACTCCACTCATACGGCTATGATCTCAAACACTGGTACCAATGTTTAGTACTCCTTATTGTCACAGGAATAATCAGCCGAATGCTTGCATTTTTTTGTATGATAACCTTCCAGAAGAAATAG 3306 0.4102 MNKRDRIRKHGFVVIIFVVFVGPQLVSCQKSNDDGDVGGSGAGIEIFAQEMYNSMSGFTSVFKGAIKKELGYCILDVDADWDGAFNFTKDLTFLTICAQEMKGDITQRMCTAGEIEAYARSFVSGDKSAGSGKAKANFLKPNINCNLSSWVNGCEPGWGCKANQKVDLESKKKEIPVRSADCQPCCEGFFCPRGITCMIPCPLGAYCPRGELNKTSGICQPYRYQLPPGKDNHSCGGADIWADITSSGEVFCSAGSYCPSTTIKSPCSRGSYCRKGSTAQERCFKLASCEPKSANQNITAYGLLVFAGLCFMLIIIYNCSDQVLATRERRQAKSRERAAASVRETQAREKWKTAKDMAKKHASGLQSQLSRTFSRKKTSKMPDFKGVLPPVGAGASKAKKKDKNNLSKIINDIEQDPDSQEGFNVQIGDKNVKKQAPRGKALHTQSQIFKYAYGQIEKEKAMQEQNKNLTFSGVISMASDIDIRKRPTIEVAFKDLTLTLKGKNKHLLRCVTGKLHPGRVSAVMGPSGAGKTTFLSALTGKAAGCYTTGQVLVNGQESSIRSFKRIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKEEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGIGIVVPDRVNPPDYYIDILEGIIKPSAGSGVTHKQLPVRWMLHNGYSVPMDMLHLIEGMSAQTGNIPTQGAPNPNAKLTVAPSFAGELWQDVKCNVEMKRDNLQLNLYNSNDLSNRNTPGSFTQYRYFLGRAGKQRLREARTQAVDFLILLLAGVCLGTLAKVSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTIIKPLVYLSMFYFFNNPRSSFTDNYIVLLCLVYCVTGIAYVLAIFLQPGPAQLWSVLLPVVLTLLATYDNEEDSKYVKFLSDLCYTKWSLEAFVISNAKRYSGVWLISRCGALHSYGYDLKHWYQCLVLLIVTGIISRMLAFFCMITFQKK* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1701 1101 MobiDBLite consensus disorder prediction 359 403 - -
Mtr4g1701 1101 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 40 1097 - -
Mtr4g1701 1101 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 40 1097 - -
Mtr4g1701 1101 ProSitePatterns ABC transporters family signature. 632 646 IPR017871 GO:0005524
Mtr4g1701 1101 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 732 IPR003439 GO:0005524
Mtr4g1701 1101 CDD ABCG_EPDR 489 715 - -
Mtr4g1701 1101 Gene3D - 481 726 IPR027417 -
Mtr4g1701 1101 Pfam ABC transporter 511 660 IPR003439 GO:0005524
Mtr4g1701 1101 Pfam ABC-2 type transporter 689 1101 IPR043926 GO:0140359
Mtr4g1701 1101 SMART AAA_5 517 718 IPR003593 -
Mtr4g1701 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 725 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1701 Mtr-Chr4 29601083 29608745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1701 518 711 Calmodulin-binding Proteins AT2G36910 28.856 2.51e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1701 - - gmx:100794093 1826.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1701 4 29601083 29608745 Mtr4g1701 4 29601083 29608745 ECH