Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1675 ATGGGATTCTCAGAAACCTCCCTGTCTGTTTTGCTATTGTTCATTTTATTTTCTTCCTTGTATGCAACTTCACGCATCACACATCATCGACATAATCCAACAAGTTTTTCACCAAATCAACGAGCAGAAAAGCTCATTAGAAGCCTTAACTTATTCCCAAAGAATCCGGTTAAGATGATACATGGTCATTCTGTCCTTGATGATTTTGTCCCTGGAAAGATCGTGGAGAAAAAGTTCTCGTTTTTTGGTCATTCTGATGGGCTTTCTATTGATAATCTTGGTCACCATGCCGGATACTATTCACTTCCTCATTCCAAAGCTGCTAGGATGTTCTACTATTTCTTTAAATCAAGAAACAATACTAATGATGACCCGGTTGTGATATGGTTGGCTGGAGGTCCTGGTTGCAGCGGTGCAATACCTTTGTTTTATGAGAACGGTCCTTTTAAAATTGCCAATAACTTGTCTCTTGTATGGAATGACTATGGCTGGGATAAGGCATCCAATATTATTTACATTGACCAACCCATTGGGACAGGTTTCAGCTACACTTCTGATGATAGTGATATTCGACATGATCAAACTAGTATTAGCAACGACTTGTACGACTTCTTGCAGGAGTTTTTTAAGCAGCACCCTGAATTCGTTAAGAACGACTTTTATATTACTGGAGAATCATACGCTGGACACTTTGCTCCAGCTCTTGCATCACGAATTCGCCGAGGAAATAAAGATAAAGAAGGAATTATTATAAACCTCAAGGGTTTTGCTGTTGGGAATGGAATGACCAACCCAAGAATTCAGTACCTAGCATACCCGCAGTATGCACTTGATATGAAATTGATTGCAAAGGAAGATCAAGACGATATCAACAAGTTGATGCCAAAATGTCATGATGCAATAAAAACTTGCGAAGCTGGAGGTAAAGAAAGTTGCTTGTTAGCTTTCAAACAGTGTGAGGGTGTAACAAATGATATCTTGTCCATTGCTGGCAACATTAATCATTATGACATCAGAAAGACATGTCATGGAGACTTATGTTATGACTTTTCAAATGTGATGAAACTTTTGAATGAAAAGACAGTTAAGGATGCTTTAGGTGTTGGGGACATAGAGTTTGTTTCATGCAGCAAAATAGTGTATGATGCTTTACAGCAAGATTGGATGAAGAACCATGAAGTAGATATTCCTTCACTTCTTGAAGAAGGAATCAAGGTTCTTATATATGTTGGAGAATTTGATCTTCTTTGCAATTGGCTTGGGAATTCGAATTGGGTTCATGCCATGGAGTGGTCGGGTCGAAACCAGTTTGTGGCGGCCAAAACAGTTCCATTTTTGGTTGATGGTGCTAAAGCAGGATTGTTGAATAGTTATGGACCTCTTTCTTTTCTAAAGGTGAATGATGCTGGACATATGGTCCCTATGGATCAACCAAAAGCTGCATTACAGATGTTGGTAAACTGGATGCAAGGAAAACTTAACTAG 1485 0.3892 MGFSETSLSVLLLFILFSSLYATSRITHHRHNPTSFSPNQRAEKLIRSLNLFPKNPVKMIHGHSVLDDFVPGKIVEKKFSFFGHSDGLSIDNLGHHAGYYSLPHSKAARMFYYFFKSRNNTNDDPVVIWLAGGPGCSGAIPLFYENGPFKIANNLSLVWNDYGWDKASNIIYIDQPIGTGFSYTSDDSDIRHDQTSISNDLYDFLQEFFKQHPEFVKNDFYITGESYAGHFAPALASRIRRGNKDKEGIIINLKGFAVGNGMTNPRIQYLAYPQYALDMKLIAKEDQDDINKLMPKCHDAIKTCEAGGKESCLLAFKQCEGVTNDILSIAGNINHYDIRKTCHGDLCYDFSNVMKLLNEKTVKDALGVGDIEFVSCSKIVYDALQQDWMKNHEVDIPSLLEEGIKVLIYVGEFDLLCNWLGNSNWVHAMEWSGRNQFVAAKTVPFLVDGAKAGLLNSYGPLSFLKVNDAGHMVPMDQPKAALQMLVNWMQGKLN* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1675 494 ProSitePatterns Serine carboxypeptidases, serine active site. 222 229 IPR018202 GO:0004185
Mtr4g1675 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 172 IPR001563 GO:0004185|GO:0006508
Mtr4g1675 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 183 IPR001563 GO:0004185|GO:0006508
Mtr4g1675 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 208 233 IPR001563 GO:0004185|GO:0006508
Mtr4g1675 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 461 474 IPR001563 GO:0004185|GO:0006508
Mtr4g1675 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 490 IPR001563 GO:0004185|GO:0006508
Mtr4g1675 494 PANTHER CARBOXYPEPTIDASE 38 490 - -
Mtr4g1675 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 461 478 IPR033124 GO:0004185
Mtr4g1675 494 Gene3D alpha/beta hydrolase 84 493 IPR029058 -
Mtr4g1675 494 SUPERFAMILY alpha/beta-Hydrolases 93 492 IPR029058 -
Mtr4g1675 494 Pfam Serine carboxypeptidase 92 491 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1675 Mtr-Chr4 29242085 29246156 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1675 K16298 - gmx:100789937 681.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3286 2 46946406 46947227 Mtr4g1675 4 29242085 29246156 PCT