Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1674 ATGGGATTCTCTAAAACCTCTCTATCTCTTTTGTTATTGTTCGTTTTGTTTTCTTCTTCATACGCAACTTCTCGCATCACACATCATCATAGTTTTTCATCAACACCAAAATTTTCACCAAACCAACGAGCTGAAAAGCTTATAAAAAGCTTTAACTTATTGCCAAAGGATCCAGTTAATATAATTCATGGTGATCACTCTATTGATCATTTTGTCCCTGGAAAACTCGTCGAGAAGAAGTTCTCGTTTTTTAGTGATTCTAATGGTCCTTCTATTGAAGATCTTGGTCATCATGCCGGATACTACTCGCTTCCTCGTTCCAAATCCGCAAGGATGTTCTATTTTTTCTTTGAATCAAGAAAAAATAATAAGGATGCCCCAGTTGTGATATGGTTGACTGGAGGTCCAGGTTGCAGTAGTGAACTAGCTTTGTTTTATGAGAATGGTCCTTTTAAAATAGCCAATAACTTGTCTCTTGTGTGGAATGATTATGGTTGGGACAAGGCATCAAATATTCTATTTGTTGACCAACCCATTGGGACAGGATTTAGTTACACTTCTAATGAAGATGATATTCCACATGATGAAACTGGTGTTAGCAATGATTTGTACGATTTCTTGCAGGAGTTTTTCAAGCAGCACCCTAAGTTCATCAAGAATGACTTCTATATTACTGGAGAATCATATGCTGGACACTATGTTCCTGCTCTTGCATCTAGGGTTCACCATGGAAATAAAGGCAAAAAAGGGATTACCATAAACCTCAAGGGTTTTGCCATAGGTAATGGGTTGACCAATCCAGCAATTCAGTACCAAGAATACTCTCAGTTTGCATTTGATAACAAAATGATTACAAAGCAAGATCAAGCTGATATCAACAAGTTGATCCCTGATTGCGAGGTTGCCATAAAAACTTGCGAGAGTAAAGGTGGAGAAAGTTGCTCGTCAGCCTTATACCAATGCGAACAGATAATCAATAATATTTTGTCCATTTCTGGTAACGTTAACTACTATGACATAAGAAAGAAATGTCAAGGACCACTGTGTTATGACTTCTCAAATTTAGAGAAACTTCTAAACAAAAAGACAGTTAGGGATGCTTTAGGTGTTGGGGACATAGACTTTGTGTCATGCAGCAGAGTGGTGTATAATGCAATGTTGCAAGATTGGATGAGAAACTTTGAAGTGGATATTCCTGAACTTCTTGAGGATGGAATTAAGGTTCTTATATATGCTGGGGAATGACTTTATTTGCAATTGGCTTGGAAATTCAAAATGGGTTCATGCAATGGGGTGGTCAGGTCAAAAACAGTTCGCGGCATCGAAAACAGTTCAATTTGTTGTTGA 1347 0.3764 MGFSKTSLSLLLLFVLFSSSYATSRITHHHSFSSTPKFSPNQRAEKLIKSFNLLPKDPVNIIHGDHSIDHFVPGKLVEKKFSFFSDSNGPSIEDLGHHAGYYSLPRSKSARMFYFFFESRKNNKDAPVVIWLTGGPGCSSELALFYENGPFKIANNLSLVWNDYGWDKASNILFVDQPIGTGFSYTSNEDDIPHDETGVSNDLYDFLQEFFKQHPKFIKNDFYITGESYAGHYVPALASRVHHGNKGKKGITINLKGFAIGNGLTNPAIQYQEYSQFAFDNKMITKQDQADINKLIPDCEVAIKTCESKGGESCSSALYQCEQIINNILSISGNVNYYDIRKKCQGPLCYDFSNLEKLLNKKTVRDALGVGDIDFVSCSRVVYNAMLQDWMRNFEVDIPELLEDGIKVLIYAGE*LYLQLAWKFKMGSCNGVVRSKTVRGIENSSICC* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1674 447 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 36 421 - -
Mtr4g1674 447 Pfam Serine carboxypeptidase 95 415 IPR001563 GO:0004185|GO:0006508
Mtr4g1674 447 Gene3D alpha/beta hydrolase 80 424 IPR029058 -
Mtr4g1674 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Mtr4g1674 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Mtr4g1674 447 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Mtr4g1674 447 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 421 IPR001563 GO:0004185|GO:0006508
Mtr4g1674 447 SUPERFAMILY alpha/beta-Hydrolases 96 415 IPR029058 -
Mtr4g1674 447 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1674 Mtr-Chr4 29237403 29241262 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1674 K16298 - gmx:100798795 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1674 4 29237403 29241262 Mtr4g1674 4 29237403 29241262 ECH
Mtr4g1674 4 29237403 29241262 Mtr2g3286 2 46946406 46947227 PCT