Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1673 ATGTTCTCTGAATGCTATAAAAACATTCCCATTGCTTCACTTTTTTCACAAACAAGAACAAACAACATGGGATTCTCCAAAACCTCTTTGCCTCTTTTTTTGTTCTTCATTTTATTTTCTGTCTCATATGCAACTTCTCGTATCATAAATCATGCACGCTTTCCATCAACAACATTTTCACCAAATCAACAAGCTGAAAAGCTTATAAGAAGCTTCAACTTATTCCCAAAGCAATCAGTTAATGTAATTCATGGTGATCATTCTCTTGATCATTTTCTACCCGGAAAGATCGTCGAGAAGAAGTTCTCGTTTTTCGGTGATTCTGGTGGTCCTTCTATTGAGGATCTTGGTCACCATGCTGGATACTATTCGCTTCCTCGTTCCAACTCTTCAAGGTTGTTCTATTTTTTCTTTGAATCAAGAAAAAATAATAAGGATGCCCCAGTTGTGATATGGTTGACTGGAGGTCCAGGTTGCAGTAGTGAACTAGCTTTGTTTTATGAGAATGGTCCTTTTAAAATTGCCAATGATTTATCTCTTGCATGGAATGACTTTGGTTGGGACCAGGCATCAAATATTCTTTTTGTTGACCAACCCATTGGGACAGGTTTTAGTTACACTTCTAATGAAAATGATATTCCACATGATGAAACTGGTGTTAGCAATGACTTATACGACTTCTTGCAGGAGTTTTTCAAGCAACATTCTGAGTTCGTTAAGAATGAGTTCTATATTACTGGAGAATCATATGCTGGGCACTATGTTCCTGCTCTTGCATCTAGGGTTCACCAAGGAAACAAAGCCAACCAAGGAATTAAAATAAATCTCAAGGGTTTTGCTATTGGAAATGGATTGACCAACCCTGAAATTCAGTACCCAGCATACACACAGTTTGCATTAGATAACAAATTGATCACAAAGGAAGAACAAGCTGTTATCAACAAGTTGATCCCACAGTGTGTAGAAACCACAAAATCTTGCGAAAGTAAAGGTGGAGAAAGTTGCTTATCAGCCTTAAGCCAATGTCAAGAGATATTCACTGATATCTTGTCCTATGCTGACGACAATATTAATTACTATGACATAAGAAAGAAATGTGAAGGACCATTGTGTTATGACTTCTCGAATGTGGAGAGACTTATGAACCAGAAGACAGTTAAGGATGCTTTAGGTGTTGGGGATATAGAGTTTGTTTCATGCAGTCTAGATGTGCATAATGCTATGGCAAAAGATTTTATGCAAAACTTTGAAGTGGATATTCCTGCACTTCTTGAAGATGGAATCAAAGTTCTTATATATGCTGGGGAATTTGATCTTATTTGCAATTGGCTAGGGAATTCAAATTGGGTTCATGCAATGGGGTGGTCAGGTCAAAAACAGTTCGCGGCATCGAAAACAGTTCAATTTGTTGTTGATGGTAAACAAGCAGGATTGTTGAATAGTTATGGACCTCTCTCTTTTCTAAAGGTGAATGGGGCAGGACATTTGGTCCCTATGGATCAACCAAAAGCTGCACTTCAGATGTTGGCAAACTGGATGCATGGGAACCTTTAA 1554 0.3797 MFSECYKNIPIASLFSQTRTNNMGFSKTSLPLFLFFILFSVSYATSRIINHARFPSTTFSPNQQAEKLIRSFNLFPKQSVNVIHGDHSLDHFLPGKIVEKKFSFFGDSGGPSIEDLGHHAGYYSLPRSNSSRLFYFFFESRKNNKDAPVVIWLTGGPGCSSELALFYENGPFKIANDLSLAWNDFGWDQASNILFVDQPIGTGFSYTSNENDIPHDETGVSNDLYDFLQEFFKQHSEFVKNEFYITGESYAGHYVPALASRVHQGNKANQGIKINLKGFAIGNGLTNPEIQYPAYTQFALDNKLITKEEQAVINKLIPQCVETTKSCESKGGESCLSALSQCQEIFTDILSYADDNINYYDIRKKCEGPLCYDFSNVERLMNQKTVKDALGVGDIEFVSCSLDVHNAMAKDFMQNFEVDIPALLEDGIKVLIYAGEFDLICNWLGNSNWVHAMGWSGQKQFAASKTVQFVVDGKQAGLLNSYGPLSFLKVNGAGHLVPMDQPKAALQMLANWMHGNL* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1673 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 195 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 196 206 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 231 256 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 PRINTS Carboxypeptidase C serine protease (S10) family signature 485 498 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 ProSitePatterns Serine carboxypeptidases, serine active site. 245 252 IPR018202 GO:0004185
Mtr4g1673 517 SUPERFAMILY alpha/beta-Hydrolases 117 515 IPR029058 -
Mtr4g1673 517 ProSitePatterns Serine carboxypeptidases, histidine active site. 485 502 IPR033124 GO:0004185
Mtr4g1673 517 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 57 515 - -
Mtr4g1673 517 Pfam Serine carboxypeptidase 116 515 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 57 515 IPR001563 GO:0004185|GO:0006508
Mtr4g1673 517 Gene3D alpha/beta hydrolase 111 517 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1673 Mtr-Chr4 29218494 29222108 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1673 K16298 - gmx:100798795 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1673 4 29218494 29222108 Mtr4g1673 4 29218494 29222108 ECH