Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1655 ATGGCATCATCATCAACATTATCTTCACTTCCATTGCAACATAGTTTCACCTCTAACTTGAACACTTCTTCTCAATTTTCCAACAAAACTTCAAGGTTCTTAATTTTCGCTCAGAAGAAAGCAAAGAAAACCCGAAAGATTATATTGAAGGAAGATATTCTTAATGTTGGAAAGAAAGGAGAGCTTCTTGATGTGAAGGCTGGATTTTTCAGAAATTATTTGTTTCCTAGTGGCAAAGCTCAGATTGCAACTGCCGATTTGCTTAAGGAATTGAAGATAGAGGAAGAAAGAATTGAGGCTGAGAAACAACGGGTAAAAGAAGAGGCACTGCAACTTGCTCAAATTTTGGAATCAGTTGGGGCTTTCAAGGTGAAGCGTAAAGGTGGTAAAGGAAAACAAATCTTCGGAAGTGTTACGGCTCAAGATCTTGTTGACATTATCAAGGCACAGCTTCAAAGGGAGGTGGACAAGAGAATTGTTGAACTTCCTGAGATCAGGGAGACAGGAGAATATATTGCAGAGTTAAAACTTCACCCTGAGGTTACAGCTAAAGTGAGTGTGAATGTTTTAGCTAACTGA 579 0.3869 MASSSTLSSLPLQHSFTSNLNTSSQFSNKTSRFLIFAQKKAKKTRKIILKEDILNVGKKGELLDVKAGFFRNYLFPSGKAQIATADLLKELKIEEERIEAEKQRVKEEALQLAQILESVGAFKVKRKGGKGKQIFGSVTAQDLVDIIKAQLQREVDKRIVELPEIRETGEYIAELKLHPEVTAKVSVNVLAN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1655 192 Gene3D - 46 105 IPR036935 -
Mtr4g1655 192 Pfam Ribosomal protein L9, N-terminal domain 46 91 IPR020070 -
Mtr4g1655 192 SUPERFAMILY L9 N-domain-like 46 101 IPR009027 -
Mtr4g1655 192 Coils Coil 84 115 - -
Mtr4g1655 192 SUPERFAMILY Ribosomal protein L9 C-domain 104 191 IPR036791 -
Mtr4g1655 192 Gene3D - 106 192 IPR036791 -
Mtr4g1655 192 Pfam Ribosomal protein L9, C-terminal domain 107 190 IPR020069 -
Mtr4g1655 192 TIGRFAM L9: ribosomal protein bL9 46 191 IPR020594 GO:0003735|GO:0005840|GO:0006412
Mtr4g1655 192 Hamap 50S ribosomal protein L9 [rplI]. 45 192 IPR020594 GO:0003735|GO:0005840|GO:0006412
Mtr4g1655 192 ProSitePatterns Ribosomal protein L9 signature. 57 84 IPR020070 -
Mtr4g1655 192 PANTHER 50S RIBOSOMAL PROTEIN L9, CHLOROPLASTIC 9 192 - -
Mtr4g1655 192 PANTHER 50S RIBOSOMAL PROTEIN L9 9 192 IPR000244 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1655 K02939 - gmx:100500390 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1655 4 29008151 29011476 Mtr4g1655 4 29008151 29011476 ECH