Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1654 ATGGCACTTTCACCCACACTTTCACCTTTAGCAACACTTTCATCATCAACACCAAGAAACAAACCACCAAAACCGTTTCTCTTTTCATCCTTCACAAAAAAGTCACAATTTTTAACAAATTCAACAAGACCCAGAAACAGAAACAGAAGAAACCTTTTAGTAACAGTTAGAAGTGTTGCAGCACCACCCACAAAAACTGAATCGTACCCAGAAGCTGAAAAGAACGAAATTGATGAAGAATTTGAAGATGAGAGTTCTTCATCGAAGTTTTCATGGAGAGATCATTGGTACCCAGTTTCTTTGATTGAAGATCTGGATTCTAGTTTGCCTACGCCGTTTCAGCTTCTGGGTCGTGAAATTGTGATTTGGTTTGATAAAGCTAATTCTCAATGGGTTGCTTTTGATGATAAATGTCCTCATCGTCTTGCTCCTTTGTCTGAAGGAAGGATAGATGAAAGTGGAAACTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGACGTGGAGGTTGCACTGTGATCCCTCAGGCTTCACCTGAAGGTCCCGAAGCACGTGCTGTTGGGTCTCCTAGAGCTTGTGCTACTAGGTTTCCTACCTTGGTGTCTCAGGGGTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAATGCATCCAAACCTCCAATGTTGCCTGATGACTTTGTAAAACCAGAGTTTGCAACGGTGAACATTCAGCGCGATCTTTTCTACGGCTATGATACTCTCATGGAGAATGTTTCTGATCCTTCTCACATTGATTTTGCTCATCACAAGGTTACAGGAAGGAGAGACAGAGCCAAGCCTCTTCCATTCAAGATGGATTCACGTGGTTCATGGGGCTTTTCAGGAGCTAATGAAGGGAACCCACGGATCAGTTCCAAATTTATTGCACCATGTTACTATATTAACAAGGTTGAGATCGATACCAAACTCCCCGTCGTTGGTGACCAGAAATGGGTAATATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATCGTTTGCAGTGCCCGAAATTTCTTCCAGCTCACGGTGCCAGGGCCTGCCTGGTGGCAAGTGGTTCCCAGATGGTATGAACATTGGACTTCAAACAAGGTATATGACGGGGACATGATTGTACTTCAAGGTCAAGAGAAAATCTTTCTTGCAGAAACAGAGAATGGCGGTGACATTAACAAACAGTACACAAGCCTCACCTTCACACCAACACAGGCCGATCGTTTTGTGTTGGCATTTAGAAATTGGCTGAGGCGACACGGCAATGGCCAACCTGAATGGTTTGGTAAGAGCAGCAGCCAGCCATTGCCTTCAACCGTACTATCAAAACGTCAGATGTTGGATAGATTTGAACAACACACACTGAAGTGTTCAGCTTGTAAAGGAGCTTATGAGGGATTCCAAACATGGCAGAAAATCCTGACTGGTGCAACAGTTGTGTTTTGCGCGACTTCTGGGATTCCATCAGATACTCAGCTGCGCATAATTTTGGCTGCACTCGCGCTTGTCAGTGCAGCCTTAGCTTTTTCCATAAACCAACTGAAAAACAATTTTGTTTTCGTCGATTATGTGCACGCTGAAATCGATTGA 1629 0.4408 MALSPTLSPLATLSSSTPRNKPPKPFLFSSFTKKSQFLTNSTRPRNRNRRNLLVTVRSVAAPPTKTESYPEAEKNEIDEEFEDESSSSKFSWRDHWYPVSLIEDLDSSLPTPFQLLGREIVIWFDKANSQWVAFDDKCPHRLAPLSEGRIDESGNLQCSYHGWSFDGRGGCTVIPQASPEGPEARAVGSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLPDDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPRISSKFIAPCYYINKVEIDTKLPVVGDQKWVIWICSFNVPMAPGKTRSIVCSARNFFQLTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAETENGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQPEWFGKSSSQPLPSTVLSKRQMLDRFEQHTLKCSACKGAYEGFQTWQKILTGATVVFCATSGIPSDTQLRIILAALALVSAALAFSINQLKNNFVFVDYVHAEID* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1654 542 Pfam Rieske [2Fe-2S] domain 95 179 IPR017941 GO:0051537
Mtr4g1654 542 CDD Rieske_RO_Alpha_PaO 89 219 - -
Mtr4g1654 542 Gene3D - 234 437 - -
Mtr4g1654 542 SUPERFAMILY Bet v1-like 203 437 - -
Mtr4g1654 542 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 96 208 IPR017941 GO:0051537
Mtr4g1654 542 MobiDBLite consensus disorder prediction 61 82 - -
Mtr4g1654 542 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 29 542 - -
Mtr4g1654 542 MobiDBLite consensus disorder prediction 1 28 - -
Mtr4g1654 542 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 29 542 - -
Mtr4g1654 542 Gene3D - 91 233 IPR036922 GO:0051537
Mtr4g1654 542 SUPERFAMILY ISP domain 89 213 IPR036922 GO:0051537
Mtr4g1654 542 Pfam Pheophorbide a oxygenase 304 398 IPR013626 GO:0010277
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1654 Mtr-Chr4 29001923 29006619 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1654 K13071 - gmx:100812162 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1654 4 29001923 29006619 Mtr4g1654 4 29001923 29006619 ECH