Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1645 ATGCAGCCGAATTTATTTCCATTCGGAAGCGCGTTGAGTAATAATCCGTTTATATTGAACGAAGGAGGAGGAGGAGGAGAAGGTGGAATCGATAGTTCTAGGGTTTTGGTTTTGCTTCCTTTCTTCTTGCTCTCTCAAGGAGGAGCAATGGATTTGTCCAAAGTTGGTGAAAAGATTTTCAGTTCTGTTAAGTCTGCTAGATCGCTTGGTTTACTTCCTTCTCTTCCTGATCGCCCCGAGGTTCCAGCTCGAGCTGTTGCTGCAGCTGCTGTAGCTCGTGCTCTTGCAGGGTTACCTCCTCATCAGAGGTATAGTCTTTCATCAAGTTCAGAAGAGCTGAGTTCAATATATGGAAGCAGATCTAATGACCCTGTAGTGGAGGAACTGGAGGATGAATTCTATGAGGAGGATTTTGATCCAATTAGGCATGTTTTGGAGCACGTTCCTTCTGAAGAAAATGAGCTAACATATTTTGAAAAGCAGGCTACCCTTAGAATAACACAACTGGACAAAGTAGCAGAGCATTTATCTCGCCATGTTATGGAGCATCATGAAGTAATGGTGAAGGGGATGAATTTGGTCAGGGAATTGGAGAAAGACTTAAGAATTGCAAATGTCATCTGTATGAATGGAAGAAGGCACCTGACATCTTCTTTGAATGAAGTTTCAAGGGATTTGATTGTGAATTCTTATTCAAAAAAGAAGCAAGCACTAGTGGATATGCTTCCAGTCTTGACTGAACTTCGACGTGCACTAGACATGCAGTCAACACTTGAATTCCTTGTAGAGGAAGGGAATTATTGGAAGGCATTTCAAGTCCTATCGGAGTATTTGCAACTCTTAGAGAGTTTCCCAGAGCTTTCGGCAATGCAAGAGATGAGCCATGGTGTGGAGGTTTGGCTGGGAAGAACTTTGCAGAAATTGGATGCTCTTTTATTGGATGTATGTCAGGAATTTAAGGAAGATGACTATCTGACCGTAATTGATGCGTATGCATTGATAGGGGATACCAGTGGTCTTGCTGAAAAGATACAAAGTTTCTTCATGCAAGAAGTCATATCAGAGACACATTCGGTGCTAAAGACTATTGTGCATGAGGATGAGGAGGGACTAGCGCAAAATAGTAGGCTCACTTACAGCGACCTATGCCTTCAGATACCTGATTCTAAGTTTAGGCAGTGCTTACTAAGAACATTGGCTGTTCTATTTGACCTTATGTGTTCATACCATGAAATTATGGATTTTCAGCTAGAGAGAAAGGATTCAGTACCACAAACATCTGATAAGTGCAATGAAGACAGTTCATGTAGTTTAGGCGAGGCTCGGGAAGTTGATTCGGTTGCAACAGCCTGCAACAATTCTATGTCCAGTTCCGGGGATGTGATACATGACTCATCTTCAACTATCAGCGCACCGACCGAAATTACTGGTTCACCACCATACAGTGATTTTCATGATCCAGTGGATGAGGCTAGAGAGGAGGAAAGTTCAGCCTCAAGCATCGATTCCCCATGGTACCATCTTCGGAAAGAAGCTACAACATTTGTTTCTCAGACCCTTCAAAGAGGACGCAAGAATCTGTGGCATCTTACTGCAAGTCGTGTCTCAGTGTTGCTTTCTTCTGCTGCAGCTTGTTCTGCTAGCATTCATCTATTCTTGAAAAATTATGAAGATCTGAGTGTATTCATTTTGACTGGTGAAGCCTTCTGTGGAATTGAAGTGGTTGAATTCAGGCAAAAGTTGAAGGTTGTTTGTGAAAACTATTTCATAGCATTTCATCGACAAAATGTGCATGCACTAAAAATGGTTTTGGAGAAGGAAACTTGGTTAAAATTACCTCCAGAGACTGTTCAACTTATCAGTTTTGCTGGACTTATTGGTGATGGAGCACCATTGATTTCTTTATCTGTTAGTAAATCAATGAATATCAATGCAATCCATTCCAATAATAAATCAGTGAACATGGTTCACACTGGTGCGAGGAAGAGTGGGTTCTCTCATTGGATTAAAAATGGAAATCCTTTTCTGCCAAAATTATCAACCTCAAAAGAAGGTCATGGTATTCCCCAACCTAATGGGTCAAGTTATGGTGAATTTGATGGAGGCTCAGTCAACAACTATCATGATGATAGAGTCTCCACTAGAAAGAATGACTCCAGTCCATTGAATGGTGCCAATTCTGTTTCAGAAGATGAAAATGAAGATCTTCTTGCTGACTTTATTGATGAAGACAGTCAACTTCCAAGTCGAAGTTCTAAACCCCATCATTCAAGATCTAACTCTTCACATGGTAATGATGAAGAGAGTACAGCACAAACTGGATCGTCACTATGTCTTTTAAGGTCTATGGACAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAGTTCTTTAAGGGAATATGCCAGTTGTTTGAAATTTTTTTCTATTTTATATATGAAACATTTGGTCAGCAGAATACTAATTCAAGTGGAAAAAGCTCAGTTAACTCTCTTAATTATCGCTTGAGGACAGCCTTATCTAGAATAAACCAAGAGTGTGAGGAGTGGCTTAAGCCGCCCCACTCATCTTCACCAACATCAAGTTCATCATTTGTACATGCAGAGTTGACACCTACAAGTCCTCCAAATATGAATTTTGGTCACCCCTCGGGGACTGCTTTTAGTCTCAAGGAAAGATGTGTGGCTGTTGACACTATATCTCTCGTTGCTCGAATACTAAATAGATCCAAAGCTCACCTCCAATCAATGCTCTTGCAAAGTAATTCAACTGTACTTGAGGATTTCTATGTTCATCTGGTGGATGCTGTACCAGATCTTACAGAGCATGTCCATCACACAACAGTAAGACTACTGCTGCACATTAATGGGTATGTTGATCGTGTTGCCAATTGTAAATGGGAAGTAAAAGAACTTGGAATGGAGCATAATGGGTATGTTGATTTGCTGCTGGGGGAGTTTAAGCACTTTAAAACACGACTCGCTCATGGAGGAATTCGTAAGGAGACTCAAGACACATTGTTGGATTATGGGCTTGACATTGTCGCGGAAACTCTTGTGGAAGGACTTTCACGGGTGAAGAGATGTAACGATGAAGGACGGGCTCTAATGTCATTGGATCTGCAGGTTTTGATAAATGGGCTAAAGCATTTTGCTTCGTTGAATGTGAAGTCCAAGCTACAAATGGTTGAAACTTTCATTAAGGCTTACTACCTTCCGGAGACAGAATATGTGCACTGGGCACGTGGGCACCCGGAATACAGTAAAAGCCAGGTTGTGGGATTGGTCAACCTTGTTGCCTCTATGAAAGGTTGGAAGAGGAAAACCAGGTTGGAAGTACTGGAAAAGATTGAGTGA 3366 0.4124 MQPNLFPFGSALSNNPFILNEGGGGGEGGIDSSRVLVLLPFFLLSQGGAMDLSKVGEKIFSSVKSARSLGLLPSLPDRPEVPARAVAAAAVARALAGLPPHQRYSLSSSSEELSSIYGSRSNDPVVEELEDEFYEEDFDPIRHVLEHVPSEENELTYFEKQATLRITQLDKVAEHLSRHVMEHHEVMVKGMNLVRELEKDLRIANVICMNGRRHLTSSLNEVSRDLIVNSYSKKKQALVDMLPVLTELRRALDMQSTLEFLVEEGNYWKAFQVLSEYLQLLESFPELSAMQEMSHGVEVWLGRTLQKLDALLLDVCQEFKEDDYLTVIDAYALIGDTSGLAEKIQSFFMQEVISETHSVLKTIVHEDEEGLAQNSRLTYSDLCLQIPDSKFRQCLLRTLAVLFDLMCSYHEIMDFQLERKDSVPQTSDKCNEDSSCSLGEAREVDSVATACNNSMSSSGDVIHDSSSTISAPTEITGSPPYSDFHDPVDEAREEESSASSIDSPWYHLRKEATTFVSQTLQRGRKNLWHLTASRVSVLLSSAAACSASIHLFLKNYEDLSVFILTGEAFCGIEVVEFRQKLKVVCENYFIAFHRQNVHALKMVLEKETWLKLPPETVQLISFAGLIGDGAPLISLSVSKSMNINAIHSNNKSVNMVHTGARKSGFSHWIKNGNPFLPKLSTSKEGHGIPQPNGSSYGEFDGGSVNNYHDDRVSTRKNDSSPLNGANSVSEDENEDLLADFIDEDSQLPSRSSKPHHSRSNSSHGNDEESTAQTGSSLCLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFYFIYETFGQQNTNSSGKSSVNSLNYRLRTALSRINQECEEWLKPPHSSSPTSSSSFVHAELTPTSPPNMNFGHPSGTAFSLKERCVAVDTISLVARILNRSKAHLQSMLLQSNSTVLEDFYVHLVDAVPDLTEHVHHTTVRLLLHINGYVDRVANCKWEVKELGMEHNGYVDLLLGEFKHFKTRLAHGGIRKETQDTLLDYGLDIVAETLVEGLSRVKRCNDEGRALMSLDLQVLINGLKHFASLNVKSKLQMVETFIKAYYLPETEYVHWARGHPEYSKSQVVGLVNLVASMKGWKRKTRLEVLEKIE* 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1645 1121 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN-RELATED 42 1121 - -
Mtr4g1645 1121 Pfam Protein of unknown function C-terminus (DUF2451) 891 1121 IPR019514 -
Mtr4g1645 1121 Pfam Vacuolar-sorting protein 54, of GARP complex 126 415 IPR019515 -
Mtr4g1645 1121 MobiDBLite consensus disorder prediction 476 497 - -
Mtr4g1645 1121 MobiDBLite consensus disorder prediction 679 731 - -
Mtr4g1645 1121 PANTHER UNCHARACTERIZED 42 1121 IPR040047 GO:0032456|GO:0042147|GO:1990745
Mtr4g1645 1121 MobiDBLite consensus disorder prediction 745 773 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1645 K23288 - gmx:100803274 1785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1645 4 28806994 28824884 Mtr4g1645 4 28806994 28824884 ECH