Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1638 ATGGACTATTTAAGTTCTTTGATGACTTTATGTTTTCTTTTTGCTACTGTGGTGTTCTATATAACAAATGGAGAACCTGTAGTTCCAGCACTTTTCATATTCGGAGACTCCATTGTAGATGTGGGAAACAACAACAACCTACATACTGTTGTAAAAGCAGACTTCTTTCCGTATGGAAGAGACTTTGTGACTAAAAATCCAACCGGAAGAATGTCTAATGGAAAACTTGCTGTAGATTATGCTTCCGAATTTGCTGGATTTACATCTTATCAACCAGCTTACCTAAACTTAAATACCAAAGGAAGCAACATCTTGAATGGTGCCAACTTTGCCTCATCTGGTTCTGGTTACCATGATTCCACATCAATACAATATCATGTAATCCCATTAATGAATCAACTGGAGTTCTACAAGGATTGCCAGGAAGAATTGGTAAAACTAGTAGGGAAAGAAAATGCAACATCAATTATTTCTGGTGCAGCATATCTTCTTGTTGATGGGTCTGGTGATTTTGCACAAAACTACTTCATAAATCCAATCCTCCAGAACCTCTATACACCTTACCAATTCTCAGACGTTCTTATTGAAGAGTACTATAATTTCATTCAGAATTTATATGCACTAGGAGCAAGGAAGATTGGTGTAACAACGTTACCTCCAATAGGTTGTATGCCTTTTATCATCACGAAGTTTGGCTATCATTCAAACAAATGTGTAGAAACAATAAACAATGTAGCCATATATTTCAACAAAAAACTTAACTTGACTACCGAAAACCTAATAAAAAAGCTTCCTGGTGTCAAATTGGTCATCTTTGACATCTACCAACCTCTATATGAACTTATTATCAGACCTTCTGATTATGGATTGTTTGAAGCAAGGAAGGCTTGTTGTGGGACAGGCTTGCTAGAGGTTGCTATATTATGCAATAAAATAAGCATAGGAACATGTGCGGATGCATCAAAATATGTATTCTGGGATAGTTTTCATACCACAGAAGCTACAAATAAGATTTTGATGGATCATTTGATTCCTACTGCAACCTCACTTTTATATTCTAACCAGACAGTTCGCTAG 1077 0.3612 MDYLSSLMTLCFLFATVVFYITNGEPVVPALFIFGDSIVDVGNNNNLHTVVKADFFPYGRDFVTKNPTGRMSNGKLAVDYASEFAGFTSYQPAYLNLNTKGSNILNGANFASSGSGYHDSTSIQYHVIPLMNQLEFYKDCQEELVKLVGKENATSIISGAAYLLVDGSGDFAQNYFINPILQNLYTPYQFSDVLIEEYYNFIQNLYALGARKIGVTTLPPIGCMPFIITKFGYHSNKCVETINNVAIYFNKKLNLTTENLIKKLPGVKLVIFDIYQPLYELIIRPSDYGLFEARKACCGTGLLEVAILCNKISIGTCADASKYVFWDSFHTTEATNKILMDHLIPTATSLLYSNQTVR* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1638 358 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Mtr4g1638 358 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Mtr4g1638 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 25 347 - -
Mtr4g1638 358 Gene3D SGNH hydrolase 21 349 IPR036514 -
Mtr4g1638 358 PANTHER GDSL ESTERASE/LIPASE EXL3 25 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1638 Mtr-Chr4 28654374 28656493 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1638 26 343 Acyl Lipid Metabolism Gene Families AT4G10950 34.062 6.03e-66 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1638 - - mtr:MTR_4g056280 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2834 2 41877024 41879600 Mtr4g1638 4 28654374 28656493 PCT