Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1614 ATGGTTGAGTCAGAACCTAAAGTTTATATACCAGAGTCATTTCAAGTGAACTATGATGTGTCAAGTCAAATTAAGATGATATGGGATGTAATGAAAGCACCATTAATTGTACCATTTTTGAATGCTTGTGTTTACATTTCATTAGCAATGGCACTTATGCTTTTTATGGAAAGAGTTTATATGGGTTTTGTTATCATTTTGGTTAAGCTTTTTTGGAAAAAACCTGAACAACGTTATAAGTATGAGCCTCTTCAAGATGATGAAGAACTTGGTGGCGAGAATTTTCCTGTTGTTCTTGTTCAAATTCCAATGTTCAATGAAAGAGAGGTTTATAAGGTTTCAATTGGAGCGGCTTGCGGGCTTTCATGGCCGACGGATCGACTCGTGATCCAAGTACTTGATGATTCTACTGACCCTGTTGTTAAGCAACTAGTGGAAATGGAATGCCAAAGATGGGCAAGTAAAGGAATAAATATAACATACCAAATTAGAGAAACAAGAGGTGGATACAAAGCAGGTGCATTGAAAGAAGGACTAAAACGTAGCTATGTCAAGCATTGTGAATATGTTGTCATATTTGATGCTGATTTTAGTCCTCCTCCTGATTTTCTTAGAAGAGCCATTCCTTTTCTTGTTGGTAATCCTGAAATTGCTCTTGTTCAAGGTCGTTGGAGATTTGTGAATGCAAATGAATGTTTGTTGACAAGAATGCAAGAGATGTCTTTGGATTACCATTTCACAGTTGAGCAAGAAGTTGGATCAGCTACTCATGCTTTCTTTGGCTTCAATGGGACGGCCGGTATTTGGAGAATTGCTGCTATCAATGAAGCAGGAGGATGGAAAGATAGAACAACAGTTGAAGATATGGACCTCGCTGTTCGAGCAAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCAAACAGTGAACTTCCAAGTACTCTGAGAGCCTTCAGATTCCAGCAGCACAGATGGTCGTGTGGTCCTGCTAATCTGTTCCGCAAAATGGCGATGGAGATTATAAGGAACAAGAAAGTGAAGTTCTGGAAGAAAGTGTATGTTATATACAGCTTTTTCCTTGTTCGCAAGATCGTAGCTCACATGGTCACTTTCTTCTTCTACTGTCTTGTAATTCCCCTCACAATTTTGGTTCCTGAGGTTCATGTTCCAATTTGGGGAGCTGTTTACATTCCTTCCATCATCACCATTCTCAACTCAGTCGGAACACCAAGGTCAATTCACCTTCTGTTCTATTGGATCCTTTTCGAGAATGTCATGTCTTTGCATCGTACCAAGGCAACCCTAATCGGTTTGCTAGAATATGGGAGGGCTAACGAATGGGTTGTGACTGAAAAACTTGGAGATTCTGTAAACAACAACAACAATAAAAAAGACAAATCTGGAGATGCAGCCAAGAAAACCAATGTCAAAGTTCAAAAGAAAACAAGATCCAAATTTATGGAAAGGCTTAATTTCTTGGAGCTAGGATTTGCAGTGTTTCTCTTCTTTTGTGGATGCTATGACTATGTTCATGGAAAACACAACTACTTTATCTACCTTTTCCTACAAACCTTAACCTTCACAATTGTAGGATTTGGTTATGTTGGAACCATAGTGTAA 1629 0.3898 MVESEPKVYIPESFQVNYDVSSQIKMIWDVMKAPLIVPFLNACVYISLAMALMLFMERVYMGFVIILVKLFWKKPEQRYKYEPLQDDEELGGENFPVVLVQIPMFNEREVYKVSIGAACGLSWPTDRLVIQVLDDSTDPVVKQLVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVVIFDADFSPPPDFLRRAIPFLVGNPEIALVQGRWRFVNANECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQANSELPSTLRAFRFQQHRWSCGPANLFRKMAMEIIRNKKVKFWKKVYVIYSFFLVRKIVAHMVTFFFYCLVIPLTILVPEVHVPIWGAVYIPSIITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEYGRANEWVVTEKLGDSVNNNNNKKDKSGDAAKKTNVKVQKKTRSKFMERLNFLELGFAVFLFFCGCYDYVHGKHNYFIYLFLQTLTFTIVGFGYVGTIV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1614 542 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
Mtr4g1614 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 86 315 IPR029044 -
Mtr4g1614 542 PANTHER - 5 542 - -
Mtr4g1614 542 CDD CESA_CaSu_A2 96 332 - -
Mtr4g1614 542 PANTHER BNAC09G36340D PROTEIN 5 542 - -
Mtr4g1614 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 375 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1614 Mtr-Chr4 28274429 28280117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1614 5 542 Miscellaneous Gene Families AT5G22740 78.704 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1614 K13680 - gmx:100802752 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1614 4 28274429 28280117 Mtr4g1614 4 28274429 28280117 ECH