Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1606 ATGGTTTTAGTAGTAACAAGACCTTTTTGTTCCTCTTCTTTACATGTTCCCTTCGATCATCATTTCCATTCTACAAAGACATACTCAACACGATTCGTCGTAGTTCGATGTACTCAGAGCAGTGTTCAGGAGATAGAAGAGAATGTGGAGTTATTGGGAAACTCAGTCTTGTTTCCTCCATTGAAAGTGGCAAAGAGAGTTGTGCTTGTTAGACATGGACAGAGTACATGGAATGCTGAAGGGAGGATTCAAGGTAGTTCTGATTTTTCTGTTCTTACTAAGAAAGGCGAGTCTCAGGCTGAGACTTCTAGACAAATGCTTCTCGAAGACAACTTCGATGCTTGTTTCGCCAGTCCTTTGGCACGATCAAAGAAAACCGCTGAAATCATTTGGGGATCTCGCCAACAACAAATTATTCCTGAGTATGACCTAAGGGAAATCGATTTGTACTCCTTTCAAGGTTTGTTGAAGGAAGAGGGAAAAGCGAGATTTGGTCCGGCTTTTCATCAATGGCAGGTGGATGCTGTGAACTTCGTCATTGATGATCATTATCCTGTGAGAGAGCTGTGGGATCGTGCTAGGAGCTGCTGGACTAAAATCCTAGCTCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTGTTGCCACAGCAATTGGTTTGGAGGCAGAGTACTTTAGAACTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCACCCCAAGAATGGACGGTGGCTCTCCCCATATTTGCCTCAATCGGTTAAATCAGACGCCTGGTTCACCTGTTGCCGGAGGGAAATCTGGAGGTAGAGAGGCAAGTAAGCGGATCGTACTTGTTTGCAACGGATCTACTCAAGGAAATACAGAGGACGGTGTTCTTTTTGGTGGTGATCAACCATTGAACATGCTTGGTGTTATACAGTCTCAGAAATCTGCAGAGCTGCTACTTGATTTGAAAGTGAGTTCTGTAATTAGCAGTCCAAACAAATCTTCCATTGAGACAGCCATGGCCATATCCCAGGTACAAGAGGCTGCAGATTGCTTGGGTGCTGACTGTGTGCCACGCTATGTTGAGACGAAGCAGAAGGAGGATCTTGATATTGAAACTATATTTAAACAATCCAAAAAGGATGTATCCAGTTTTCCTCCATTTCAGCCTGGATGGTTAAATAAAGTTGAAGATGAATTCAGAACAGCATTATGGGATCAATCGGGAAAAGCCTGGCAATCCCTTTTGGATGAAATATCTGATGAATCTAGATCAGGAGACGTCGTCGTTACAGTTTGTCATCCTGCGATTCACATAGGACTAATGGCACAATGTCTTAACTTGACCAAGGAATGGCTGGGATCATTTCACCTCGATGCTGGGAGCGTTAGCGTCCTCGACTTCCCCGATGGCCCTAAGGGAAGAGGCGTAATCAGGTGCATAAATTATACGGCACACTTGGGAAGATGGTCCATCCCTATTACAAGACCAACAGAGGACGCTGAAGAGTTTTAA 1530 0.4412 MVLVVTRPFCSSSLHVPFDHHFHSTKTYSTRFVVVRCTQSSVQEIEENVELLGNSVLFPPLKVAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTKKGESQAETSRQMLLEDNFDACFASPLARSKKTAEIIWGSRQQQIIPEYDLREIDLYSFQGLLKEEGKARFGPAFHQWQVDAVNFVIDDHYPVRELWDRARSCWTKILAHDSRSVLVVAHNAVNQALVATAIGLEAEYFRTLLQSNCGVSVLDFTPRMDGGSPHICLNRLNQTPGSPVAGGKSGGREASKRIVLVCNGSTQGNTEDGVLFGGDQPLNMLGVIQSQKSAELLLDLKVSSVISSPNKSSIETAMAISQVQEAADCLGADCVPRYVETKQKEDLDIETIFKQSKKDVSSFPPFQPGWLNKVEDEFRTALWDQSGKAWQSLLDEISDESRSGDVVVTVCHPAIHIGLMAQCLNLTKEWLGSFHLDAGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRPTEDAEEF* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1606 509 SUPERFAMILY Phosphoglycerate mutase-like 283 497 IPR029033 -
Mtr4g1606 509 Gene3D - 65 267 IPR029033 -
Mtr4g1606 509 CDD HP_PGM_like 284 484 IPR013078 -
Mtr4g1606 509 Gene3D - 277 496 IPR029033 -
Mtr4g1606 509 CDD HP_PGM_like 66 253 IPR013078 -
Mtr4g1606 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 280 354 - -
Mtr4g1606 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 429 509 - -
Mtr4g1606 509 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 35 250 - -
Mtr4g1606 509 SUPERFAMILY Phosphoglycerate mutase-like 65 251 IPR029033 -
Mtr4g1606 509 Pfam Histidine phosphatase superfamily (branch 1) 285 476 IPR013078 -
Mtr4g1606 509 Pfam Histidine phosphatase superfamily (branch 1) 67 249 IPR013078 -
Mtr4g1606 509 SMART PGAM_5 66 220 IPR013078 -
Mtr4g1606 509 SMART PGAM_5 284 446 IPR013078 -
Mtr4g1606 509 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 69 78 IPR001345 GO:0003824
Mtr4g1606 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 280 354 - -
Mtr4g1606 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 429 509 - -
Mtr4g1606 509 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 35 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1606 Mtr-Chr4 28140462 28146091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1606 K22200 - gmx:100798495 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1606 4 28140462 28146091 Mtr4g1606 4 28140462 28146091 ECH