Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1584 ATGAACTCACAGGACTTTCTGAAGGGAAAAACCATTTTAGTAACTGGTGCAACTGGCTTCTTAGCAAAAGTTTTTGTTGAAAAGATACTAAGCATCCAACCAGAGATAAAAAAACTGTATCTACTCGTAAGAGCTTCAAAGACTGACTTGGCTGAACACCGTTTGCAAAATGAGGTGTTTGAAATTGATTTATTTCGGGTGTTGCGAGCAAAGTGGGGTGAAAAGTTTAGTTCTTTCATATCAAAGAAGGTTGTGGCAATAGCAGGAGATGTTGCTGTTGAAAATTTGGGAATAAAAGATCAAAACATTTTAAATGAGATATTTGAAGAGATAGACCTTCTTGTCCATTTTGCTGCATCCACCAAATTTGATGAAAGGTTTGACATATCGATGGGTGTTAATACAAAAGGTCCTTTACATGCAATGAACATCGCAAAGAATTGCAAGAGAATAAAGGCTTTTCTGCATATATCTACCGCATATGTATGCGGAGATGCTAAAGAAGGACATACACTTTTAAGAGAGACACCATTCAAGATGGATCAATCCCTAAAAGGGACTTCAAAATTAGACATACACACAGAAATGAATTTGTTGGAGAGAAAATTAATTGAACTCAAAGTAATGAATGCGGATGAAAATACAACGAAATGGGCAATGAAAGATTATGGAATGGGAAGAGCAAATTTGCATGGCTGGCCTAATACATATACATTCACAAAGGCAATGGGAGAGATGCTTTTAGTGCATCATAAAGATGATGTACCATTGATCATTATACGCCCTACGATGGTAACTAGTACAAGCAAGGATCCCTTTCCCGGTTGGATTGAAGGTTTAAGAACTATTGACAGCGTGATATATAGGATTGGTCAAGGGAAACTGAAATTCTTTCTTGGTAATCCCAACACAATTTTAGATGCAATACCTGCAGACATGGTCATCAATTGTGTGATTACTGCCATTTTTATTCACTCAAATCAAGCTCCTAAGAATTTCATCTACCATGTTTCTTCGTCATTAAGAAATCCACTCAAATTATCTGATGTATGGAACATTAGCCATCATTATTTCATGAAAACCCCTTACATAAATCAAAATGGAAAGCCAATAGTCATTTCCAAGGGCATTGTGGTGAATAGTTTTGTTGCTTTCAACATTTATATGATAGTCCGATATGTCTTGCTACTAATGGTCCTAAATTTGGTGAACAAAATTTGTCGCCACAGCTTCCAAGATGTCTATGAGAAGAAAAGCAGAAACATTAGCATGATGGAACGATTGGCAAAACTATACAGACCATTTGTGTTTTTTAAGTCTGTTTTTGATGACACCAACACGGAAATTTTAAGGATGGCAACAAAGGATCATCTCAAGGCCGAGAATGAAGCATTGAACTTTGACCCCACTAGCATTGATTGGACAGACTATATGATGAATACACACATTCCTGGTCTCCTTAAGTATCAAACAAAATAG 1479 0.3651 MNSQDFLKGKTILVTGATGFLAKVFVEKILSIQPEIKKLYLLVRASKTDLAEHRLQNEVFEIDLFRVLRAKWGEKFSSFISKKVVAIAGDVAVENLGIKDQNILNEIFEEIDLLVHFAASTKFDERFDISMGVNTKGPLHAMNIAKNCKRIKAFLHISTAYVCGDAKEGHTLLRETPFKMDQSLKGTSKLDIHTEMNLLERKLIELKVMNADENTTKWAMKDYGMGRANLHGWPNTYTFTKAMGEMLLVHHKDDVPLIIIRPTMVTSTSKDPFPGWIEGLRTIDSVIYRIGQGKLKFFLGNPNTILDAIPADMVINCVITAIFIHSNQAPKNFIYHVSSSLRNPLKLSDVWNISHHYFMKTPYINQNGKPIVISKGIVVNSFVAFNIYMIVRYVLLLMVLNLVNKICRHSFQDVYEKKSRNISMMERLAKLYRPFVFFKSVFDDTNTEILRMATKDHLKAENEALNFDPTSIDWTDYMMNTHIPGLLKYQTK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1584 492 Gene3D - 2 371 - -
Mtr4g1584 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 5 489 IPR026055 GO:0080019
Mtr4g1584 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 335 IPR036291 -
Mtr4g1584 492 CDD FAR-N_SDR_e 10 362 - -
Mtr4g1584 492 PANTHER FATTY ACYL-COA REDUCTASE 5 489 - -
Mtr4g1584 492 CDD FAR_C 420 489 IPR033640 -
Mtr4g1584 492 Pfam Male sterility protein 393 491 IPR033640 -
Mtr4g1584 492 Pfam Male sterility protein 14 317 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1584 Mtr-Chr4 27704045 27712880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1584 6 442 Acyl Lipid Metabolism Gene Families AT3G44560 49.886 1.29e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1584 K13356 - gmx:100793736 530.406