Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1566 ATGCCTAAATCTCCAGAACAAAAAGATGGATCTGAAAATCAAACACCAAAATCAAATTTCATCGATTCATTTTTCACTCATTTTTCAACAACTAAACCTAAAATGAAACGCACCGTTCGACCATTTTTTATTCTCCTCCTTCTCTTAGTTTTCATTGCTACGTTAACTTCACGCGCTATTCTCCGCAAAGGTATACTCTCAATCGAGCTCGAAGCGCGTGTCTTCACTCGCGATCCACCGTCGCTTAACGCAACCTTACTCCACCACGCCGCCGTCGAGATCGGTGAGGAAAAAACCCGCCGAGAGATTCAGCAGCTTCTCGACGGTAACTTCGCTAGTCAAGCTCGTCATAGAACCTTTGTCTCATGGCGGAGGTTCATCCATCATGACGGTGGTGATAAGACTTATCCGGCGACACTCCGGTCACCGTTGTTTTATCGGTATTGGATTGATTTTCGACGAGTTTTGCATGATTGGGCGAGAAAACGGAGATTTCAACCGGGGATTATGGCCGAATTGACTCGATCGGTGAAAGTTCCGATTGATCGGTATAACAAAGCTGTTAATGTTGATTCAGGTGATTTGAAGAAGTATTCATCTTGTGCTGTTGTTGGTAATAGTGGAATTTTGCTTAATAGAAACTATGGTGCGTTAATTGATGCACATGAATTTGTGATTAGGTTAAACAATGCTAGGGTTGATAACTATGAATCAAAAGTTGGGAAAAAGACAAGTATATCCTTTGTGAATAGCAACATTTTGCATTTGTGTGCAAGAAGATCAGGGTGTTTTTGTCATCCATATGGTGCAAATGTTCCTATAGTTATGTACATTTGTCAAGCTGTTCATTTCTTGGATTATACTGTTTGTAATGCTTCTCATAAGTCGCCGTTGTTGGTGACGGATCCGAGGTTCGATGTTTTGTGTTCTAGGGTTGTGAAGTATTATTCTTTGAAGAGATTTGTGGAGGAAACTGGGAAGGGTTTGGAGCAATGGGGTTCGGCGCATGATGGTGCATTGTTTCATTATTCTTCTGGGATGCAAGCTGTGATGTTGGCTTTAGGAGTTTGTGAGAAAGTTAGTCTTTTTGGGTTTGGTAAATCGGCTGCGGCAAAACATCATTATCATACTAATCAGAAAGCTGAGCTTCATTTGCATGATTATGAGGCGGAGTATGCTTTTTATCGCGATCTTATGGAGGGAGATAAGCCTATACCGTTTGTATCGGAGAAGTTTAAGATTCCTCCTGTTGTAATGTATCGATGA 1266 0.4139 MPKSPEQKDGSENQTPKSNFIDSFFTHFSTTKPKMKRTVRPFFILLLLLVFIATLTSRAILRKGILSIELEARVFTRDPPSLNATLLHHAAVEIGEEKTRREIQQLLDGNFASQARHRTFVSWRRFIHHDGGDKTYPATLRSPLFYRYWIDFRRVLHDWARKRRFQPGIMAELTRSVKVPIDRYNKAVNVDSGDLKKYSSCAVVGNSGILLNRNYGALIDAHEFVIRLNNARVDNYESKVGKKTSISFVNSNILHLCARRSGCFCHPYGANVPIVMYICQAVHFLDYTVCNASHKSPLLVTDPRFDVLCSRVVKYYSLKRFVEETGKGLEQWGSAHDGALFHYSSGMQAVMLALGVCEKVSLFGFGKSAAAKHHYHTNQKAELHLHDYEAEYAFYRDLMEGDKPIPFVSEKFKIPPVVMYR* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1566 421 PIRSF Sialyl_trans 34 409 IPR012163 GO:0006486|GO:0008373
Mtr4g1566 421 Pfam Glycosyltransferase family 29 (sialyltransferase) 189 400 IPR001675 GO:0006486|GO:0008373
Mtr4g1566 421 Gene3D Glycosyl transferase family 29 145 404 IPR038578 -
Mtr4g1566 421 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 34 421 - -
Mtr4g1566 421 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 34 421 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1566 196 365 Glycosyltransferase AT3G48820 24.118 8.27e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1566 K00786 - gmx:100816284 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1566 4 27395837 27397864 Mtr4g1566 4 27395837 27397864 ECH