Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1559 ATGATGGATCAGCTTCCTGTTGAAGTGATTGGGAACATACTATCCCATCTCAAGTCTGCAAGGGATGTGGTGATAGCCTCGGCAACATGCAAGAAATGGCGAACTGCATGTTGCAAACATCTCCACACATTGTCCTTTAGCTCGAATGATTGGTCGGTTTACCGCGATTTATCAACGACCCGTCTCGAGATTTTGATTACACAGACCATTTTTCAGACATCCGGGTTGCAGTCACTTTCCATTTTGATGGAAGATGTCGATGAATTCTCGGCTTCTGCTGTTATTGCTTGGCTTATGTACACCAGAGAGACTCTGAGGCAATTGTTTTATAATGTGAAGACTATGCCAAATGTTAACATTCTGGAGATTTGTGGGAGGCATAAGCTGGAAATACTTGATTTGGAGCATAATTCCATTGTTGGGGTTGAGCCGAATTATCAGAGGTTTCCGTGTTTGAAATCACTTTCGTTGAGTTGTGTTAGTATATCTGCGTTGGATTTGAATCTTTTGGTTTCTGCGTGTCCAAGGATTGAAGCTTTGGAGCTTGTTAATCCGGAGATTGCAATGTCTGATGCAATGGTGACTGTTGAATTGAGTAGCTCGACGCTGAAGAGTGTTTATGTTGAAGCAATCAGTTTGGACAAGTTTATATTGGAGGCTGATGGGATTGAGTCTCTTCATTTGAAAGATTGTGCGCTTGAGGTTTTTGAACTCATTGGCAAGGGAACCTTGAAGAATTTTAGGATTGACGATGTTAGTGTTATACATCTTGATATTGGCGAGACGGTCGAGAATCTTGAGAGTGTGGATATCAGCAACTTCACAATCATTTGGCCAAAATTTTACCAGATGATTTCGAGATCGTCAAATTTGAAGAGGCTTAGGCTTTGGGATGTGATGTTTGATGATGAGGACGAGGTTGTGGATTTGGAAACAATCGCCACTTGCTTTCCACACCTGACTCATTTATCTTTGAGTTATGATGTGAGAGATGGAGTTCTTCACTATGGTTTACAAGGCTCTTCTCATCTGGAGAATGTTGTTGTTTTGGAGCTTGGCTGGAATGTGATTAATGATCTTTTCTCCCAGTGGGTCGAGGGGCTTCTTAAACGATGTCCTATTCTCAAGAAGCTAGTCATCCATGGTGTTGTTTCCGAGGCTAAATCTGATGAAGAATGCAAGATGTTAGCCAATTTCACCACATCCATGGTTGAGCTGATGAGGAGATACACAGATGTAGATCCACATTTTAAGTTTGAATAA 1263 0.4157 MMDQLPVEVIGNILSHLKSARDVVIASATCKKWRTACCKHLHTLSFSSNDWSVYRDLSTTRLEILITQTIFQTSGLQSLSILMEDVDEFSASAVIAWLMYTRETLRQLFYNVKTMPNVNILEICGRHKLEILDLEHNSIVGVEPNYQRFPCLKSLSLSCVSISALDLNLLVSACPRIEALELVNPEIAMSDAMVTVELSSSTLKSVYVEAISLDKFILEADGIESLHLKDCALEVFELIGKGTLKNFRIDDVSVIHLDIGETVENLESVDISNFTIIWPKFYQMISRSSNLKRLRLWDVMFDDEDEVVDLETIATCFPHLTHLSLSYDVRDGVLHYGLQGSSHLENVVVLELGWNVINDLFSQWVEGLLKRCPILKKLVIHGVVSEAKSDEECKMLANFTTSMVELMRRYTDVDPHFKFE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1559 420 SUPERFAMILY RNI-like 37 383 - -
Mtr4g1559 420 Pfam F-box-like 3 40 IPR001810 GO:0005515
Mtr4g1559 420 PANTHER - 2 418 - -
Mtr4g1559 420 PANTHER F-BOX PROTEIN-LIKE 2 418 - -
Mtr4g1559 420 Gene3D Ribonuclease Inhibitor 113 406 IPR032675 -
Mtr4g1559 420 Gene3D - 1 45 - -
Mtr4g1559 420 SMART fbox_2 5 46 IPR001810 GO:0005515
Mtr4g1559 420 SUPERFAMILY F-box domain 1 54 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1559 Mtr-Chr4 27313673 27315881 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1559 - - gmx:100804357 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1559 4 27313673 27315881 Mtr4g1559 4 27313673 27315881 ECH