Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1555 ATGGCATCCTTGTCAGCTGTGAATGTTTCCCCGCTATGCATGATTCAAACTGCAAACCGCAATCAATCAACCATTGCTACCACAGCGAAGTTCCCTTCATCTTTCGGGTCTACAAAGACTTATTCCAAAACTTGTGGCTTGAAGTCATCATCTTCATATAGAACAACTGCAATGGCTGCTTACAAGGTTAAGCTAATTGGACCAGATGGAAAAGAGAATGAGTTTGACGCCCCCGATGATGTTTACATCTTAGATGCAGCAGAGGATGCCGGAGTTGAACTCCCTTATTCATGCCGTGCTGGAGCTTGCTCTACTTGTGCTGGAAAGATTGTTTCTGGCTCGGTGGATCAATCTGATGGCTCATTCTTGGATGATAATCAACTTAAGGACGGCTTTGTGCTTACCTGTGTTTCCTATCCAACCGCAGATTGCATAATTGAAACTCACAAGGAAGGGGAACTCTACTGA 468 0.4444 MASLSAVNVSPLCMIQTANRNQSTIATTAKFPSSFGSTKTYSKTCGLKSSSSYRTTAMAAYKVKLIGPDGKENEFDAPDDVYILDAAEDAGVELPYSCRAGACSTCAGKIVSGSVDQSDGSFLDDNQLKDGFVLTCVSYPTADCIIETHKEGELY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1555 155 TIGRFAM fdx_plant: ferredoxin [2Fe-2S] 59 155 IPR010241 GO:0009055|GO:0022900|GO:0051537
Mtr4g1555 155 Pfam 2Fe-2S iron-sulfur cluster binding domain 68 141 IPR001041 GO:0051536
Mtr4g1555 155 PANTHER FERREDOXIN 5 155 - -
Mtr4g1555 155 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 98 106 IPR006058 GO:0051537
Mtr4g1555 155 PANTHER FERREDOXIN 5 155 - -
Mtr4g1555 155 Gene3D - 58 155 IPR012675 -
Mtr4g1555 155 CDD fer2 63 147 IPR001041 GO:0051536
Mtr4g1555 155 ProSiteProfiles 2Fe-2S ferredoxin-type iron-sulfur binding domain profile. 61 152 IPR001041 GO:0051536
Mtr4g1555 155 SUPERFAMILY 2Fe-2S ferredoxin-like 54 154 IPR036010 GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1555 Mtr-Chr4 27273527 27276527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1555 K02639 - gmx:100785611 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1555 4 27273527 27276527 Mtr4g1555 4 27273527 27276527 ECH