Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1554 ATGACAACCTTTTCCTTCTTCAAATCACTTCTTTTCTTTCTTCTCACCATTTCAGATTCATTTATGCAAATCAATGGCCTAAGTTTTGGAATAAACTATGGACAAATAGCAAGAAATCTACCTTCTCATTCAAGAGTTGCTATGCTTATAAGATCAATGAATGTGACAAGAATCAAACTCTATGATGCTGATCCAAATGTTCTACTTGCTTTCTCAAAATCAAATGTTGAATTTGTTATAGGAATTGGAAATGAGCATTTACAAAATATGACAAACCCTTCTAAAGCTCAAAATTGGATTCAACATCATGTTCTACCTTACCTTTCACAAACCAAAATAAATTGCATAACTGTTGGAAATGAAGTATTCAATAGCAATGATACTCAATTAATTTTGAATCTTCTACCTTCAATGCAAAATGTTCATAATTCTCTTGTTAAGCTTGGATTAGACCAAGTAATTACTGTTACAACAGCTCATTCTTTTAACATTTTGGATAATTCTTACCCTCCTTCGTCCGGTTCTTTTAGGTCAGATTTGATTCAATATATTCAACCAATTGTTGAATTTCTTGATGAAATCAAATCATCTTTTCATATTAATGCTTACCCTTTTTTTGCATATAAAGATAACCCTAATGAGGTATCTTTAAACTATGCATTATTTCAACCAAATGAAGGTTTGGTTGATCCAAACACAAATTTGCATTATGATAACATGTTATATGCTCAAATTGATGCTGTTTATGCTGCAATCAAAGTGATAGGGTATACCAATGTTGAAGTTAAGGTTTCTGAGACAGGTTGGCCTTCAAATGGCGACGCCGATGAAATTGGTGCTACACCACAAAATGCAAAATTGTACAATGGAAATTTGCTTAGAAGAATTGAGGAAAAACAAGGAACTCCTGGAAAACCATTGGTTCCAATTGATGTATATGTTTTTGCACTTTTTAATGAAGATTTGAAACCTGGTCCTGCTTCTGAAAGAAACTATGGACTTTATTATCCTGATGGTAGCCCAGTTTATAACATTGGATTGCAGGGTTATCTACCACAAATGGTTGTGCCATCCAAATCTAATATTTTGTCTTTCAATGTTCTTGCATGTATAGTTACATGCTTGATCTTTGCTTTAGAGATTTTAGAATCATGA 1155 0.3264 MTTFSFFKSLLFFLLTISDSFMQINGLSFGINYGQIARNLPSHSRVAMLIRSMNVTRIKLYDADPNVLLAFSKSNVEFVIGIGNEHLQNMTNPSKAQNWIQHHVLPYLSQTKINCITVGNEVFNSNDTQLILNLLPSMQNVHNSLVKLGLDQVITVTTAHSFNILDNSYPPSSGSFRSDLIQYIQPIVEFLDEIKSSFHINAYPFFAYKDNPNEVSLNYALFQPNEGLVDPNTNLHYDNMLYAQIDAVYAAIKVIGYTNVEVKVSETGWPSNGDADEIGATPQNAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDLKPGPASERNYGLYYPDGSPVYNIGLQGYLPQMVVPSKSNILSFNVLACIVTCLIFALEILES* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1554 384 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 10 361 - -
Mtr4g1554 384 Pfam Glycosyl hydrolases family 17 30 345 IPR000490 GO:0004553|GO:0005975
Mtr4g1554 384 SUPERFAMILY (Trans)glycosidases 29 345 IPR017853 -
Mtr4g1554 384 Gene3D Glycosidases 28 351 - -
Mtr4g1554 384 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 10 361 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1554 Mtr-Chr4 27264360 27266491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1554 79 383 Glycoside Hydrolase AT2G27500 60.784 7.64e-145 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1554 - - ccaj:109798347 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1554 4 27264360 27266491 Mtr4g1554 4 27264360 27266491 ECH
Mtr2g3332 2 47380864 47386794 Mtr4g1554 4 27264360 27266491 PCT