Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1534 ATGGCTATTGCTTCAACCGAAAGCAAGATGGTTTCGTCATCATCATCATCAACATCAAGCATCACCACCATGCACCATGATATCCTCCATACACACATCCTCACCCACCTCGACGCCGCCACGCTCGCCACCACTGCCTCCACTTGCTCTCACCTCCGCCACCTCTGCATGGATAATGATCTTTGGAAAAAAATCTGCACCGAGACGTGGCCGTCGTTACTAGATTCTACCACCAGCCATGTCATCTCCACTTTCCCAAATGGTCACCGTTCGATTTTCTCAGACGCATTTCCCACTCTTCATCATTTCTCTTCTCATTCAAAATCAAATCATCCTCCGTCACCTCCTCCGCCAGAAGAGCTTATCTCTGCTGTGGATATACACTACAAAGGTAAGCCGGTGTTTTCCAGAGTTCAGCGAACTGAAACGAAAAAGAACATGTTTCTCACGTCGTCGTTATATATTGGAACTTTGGAACCAAATGAGCTGGTTCCAACTCCGGTGAAGTTTGTTAGAAAAAATGAAGAATGGATGAAGAATTTGGAAGAGAATTTATCATTAAGCTGGATTATCATCGACCCGACTGGAAAACGTTCAGCGAACGTTTCCAGCCGGAAGCCGGTATTAGTACGACGTCACTGGCTAACAAGAGACATGGAGATTCTTTTCGCGGTGACAATGGCGGGAGAGACACGACGATCAACCGAGATGGTCCAGTGTATGGTGAAGGTGACATGTTGTGGGAAAGTTGGGGGTGAATTGTACATGAGGGAGGTGAGTTTAGTAATGGAGGATATGGAAGGAGGGGAGGTTAGTGGGAAAGAAGGGGTTGGGATATTGATGAAGGCAATGGAGTTTGGAGAGAGGAAGAAAGTTAGTGAAGTGGGAGAGATGAAAGAGAGGTATGAGAGATTCTTGGGGTTGATTAGGGAGAGGAGAGAGATGAAGTTTAAGAGACAGAAGGTACGTGATGGTGTTTCTACCATTGTTGCGTTTGTTGTTTGTGTTTGGTTTTGTTACTTGGCTGGTTTATGA 1035 0.4589 MAIASTESKMVSSSSSSTSSITTMHHDILHTHILTHLDAATLATTASTCSHLRHLCMDNDLWKKICTETWPSLLDSTTSHVISTFPNGHRSIFSDAFPTLHHFSSHSKSNHPPSPPPPEELISAVDIHYKGKPVFSRVQRTETKKNMFLTSSLYIGTLEPNELVPTPVKFVRKNEEWMKNLEENLSLSWIIIDPTGKRSANVSSRKPVLVRRHWLTRDMEILFAVTMAGETRRSTEMVQCMVKVTCCGKVGGELYMREVSLVMEDMEGGEVSGKEGVGILMKAMEFGERKKVSEVGEMKERYERFLGLIRERREMKFKRQKVRDGVSTIVAFVVCVWFCYLAGL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1534 344 PANTHER F-BOX PLANT-LIKE PROTEIN 16 339 - -
Mtr4g1534 344 Gene3D - 8 112 - -
Mtr4g1534 344 SUPERFAMILY F-box domain 15 91 IPR036047 GO:0005515
Mtr4g1534 344 PANTHER F-BOX PROTEIN-RELATED 16 339 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1534 Mtr-Chr4 27043598 27044853 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1534 - - lang:109352354 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1534 4 27043598 27044853 Mtr4g1534 4 27043598 27044853 ECH
Mtr2g2904 2 42604324 42605690 Mtr4g1534 4 27043598 27044853 PCT