Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr4g1528 | ATGGCAACCGTTCCTTCTGTAGCTGCAGTCTTAAGAAGGCTTGAGGGGAAGGTGGCTTTGATTACCGGCGGTGCAAGCGGCATCGGAGAGGCCACTGCAAGACTCTTCACCGAGCATGGAGCTCAAGTCATTATAGCTGACATCCAAGACGACAAAGGTTACTCAGTTTGCAAAGACTTACACAAATCATCTGCTTCCTATGTTCATTGTGACGTGACAAAGGAAAAAGACATTGAAAATGCCGTGAACACAACGATTTCCATGTACGGCAAACTAGACATCATGTTTAACAATGCCGGCATAGTGGGAGCAAACAAAACAAATATACTTGAATACAAGTTATCAGAATTTGAGGAAGTGATTAATGTTAACTTGGTTGGTGTCTTTCTTGGAACAAAGCACGCATCAAGGGTAATGATCCCCGCTCGACGAGGTAGCATAATTAACACAGCTAGTGTTTGTGGAAGCATAGGTGGTATGGCTTCACATGCCTACACAAGTTCAAAGCATGCTGTTTTGGGGCTGATGAGAAACACGGCAATCGAACTTGGACCGTTCAGTATTCGGGTGAATTGTGTTTCACCTTATATTGTCGCCACACCGATGGCTAAGAACTTCTTAAAGCTTGATGATGAAGGGCTTCTAGGGCTTTATTCTAACCTAAAGGGTACTAATCTTGTGCCTAAAGATGTGGCTGAAGCTTCTCTTTACTTGGGCAGTGACGAATCTAAGTATGTTAGTGGTCACAATCTTGTCGTAGATGGAGCAGTCAGTGTCTCTAACAATGGATTTTCTGTGTTTGGACAATCTGTCTAA | 816 | 0.435 | MATVPSVAAVLRRLEGKVALITGGASGIGEATARLFTEHGAQVIIADIQDDKGYSVCKDLHKSSASYVHCDVTKEKDIENAVNTTISMYGKLDIMFNNAGIVGANKTNILEYKLSEFEEVINVNLVGVFLGTKHASRVMIPARRGSIINTASVCGSIGGMASHAYTSSKHAVLGLMRNTAIELGPFSIRVNCVSPYIVATPMAKNFLKLDDEGLLGLYSNLKGTNLVPKDVAEASLYLGSDESKYVSGHNLVVDGAVSVSNNGFSVFGQSV* | 272 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr4g1528 | 271 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 15 | 257 | IPR036291 | - | |
| Mtr4g1528 | 271 | PANTHER | MOMILACTONE A SYNTHASE | 7 | 264 | - | - | |
| Mtr4g1528 | 271 | PANTHER | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) | 7 | 264 | - | - | |
| Mtr4g1528 | 271 | CDD | secoisolariciresinol-DH_like_SDR_c | 13 | 258 | IPR045309 | GO:0016616 | |
| Mtr4g1528 | 271 | ProSitePatterns | Short-chain dehydrogenases/reductases family signature. | 152 | 180 | IPR020904 | GO:0016491 | |
| Mtr4g1528 | 271 | Gene3D | - | 7 | 268 | - | - | |
| Mtr4g1528 | 271 | PRINTS | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 90 | 101 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 145 | 153 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 165 | 184 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 18 | 35 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 90 | 101 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 139 | 155 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 165 | 184 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 186 | 203 | IPR002347 | - | |
| Mtr4g1528 | 271 | PRINTS | Glucose/ribitol dehydrogenase family signature | 221 | 241 | IPR002347 | - | |
| Mtr4g1528 | 271 | Pfam | Enoyl-(Acyl carrier protein) reductase | 23 | 255 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr4g1528 | Mtr-Chr4 | 26974306 | 26975569 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mtr4g1528 | 2 | 259 | Acyl Lipid Metabolism Gene Families | AT1G24360 | 30.153 | 1.17e-30 | 115 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr4g1528 | - | - | gmx:100782627 | 423.32 |
Event-related genes