Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1502 ATGGAGCACCCTCCCACTAGAAATATCCCTACAAGATCTTCTGACATTGGTTTTGTCCGGCGTCTGACGTTGACAGTGGTAACCATCTTTGTCATTTTCATGGCCATCATTGGCATAGCTTGGTTTGTCATGCATCCACACGACCCTAGTTTTACGGTGACATCACTTTCTGTCTCAAACTTCACTGTGTCTGATTCACAGCTTACAGGCGTGTTCGAGGCGGGACTGACCATAACAAACAAAAACAAAAAAATCCAATTGATTCTCGACAATTTCGGTGTGGTGATACTTTACGGTGAAACCGTGCTCTCGGAAGCTGAGGTGCAACAACCTATACTTTTGGTAAAGATGAGTAACAAGAGTATGAAGGTTGACTTGGTAACGACGAATTCAGCGAAGTTCGTGCATAAGGTGGTGCAAGAGAATCTAGTTGAGGAATGGAACAAAGGGGTGGTGAATTTTGATGTGAAGATGGTTGTTAGAGTTGGATTTGAAGCTGGAATATGGCCAAGCAAGGAAAAGACATTGTGTGTTTCTTGTGGGGACTTGGATGTGGAATTCTATTCTACAAAAGACACTGGAAAACTATTGGGTATTGGGAAGAACTGCAACATAGTTGAAGCTAAACCATAG 633 0.4281 MEHPPTRNIPTRSSDIGFVRRLTLTVVTIFVIFMAIIGIAWFVMHPHDPSFTVTSLSVSNFTVSDSQLTGVFEAGLTITNKNKKIQLILDNFGVVILYGETVLSEAEVQQPILLVKMSNKSMKVDLVTTNSAKFVHKVVQENLVEEWNKGVVNFDVKMVVRVGFEAGIWPSKEKTLCVSCGDLDVEFYSTKDTGKLLGIGKNCNIVEAKP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1502 210 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Mtr4g1502 210 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 1 203 - -
Mtr4g1502 210 PANTHER HARPIN-INDUCED 1 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1502 Mtr-Chr4 26619385 26620017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1502 4 180 EF-hand Containing Proteins AT5G21130 25.521 4.46e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1502 - - adu:107477673 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1502 4 26619385 26620017 Mtr4g1502 4 26619385 26620017 ECH