Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1500 ATGAGAAAACTAAATGAAGAACGAGTTGTTATCGTAGGTGGTGGTATTGCTGGTTCTATCGTCGCTAAATCTCTTCAATTTCATGCACATGTCATCCTCATTGATCCGAAGGAATATTTTGAGATTACATGGGCAAGTTTGAGGTCAATGGTGGAACCATCCTTTGCAGAAAGGACATTGATAAACCATAGACAGTATTTCACAAAAGGTGACCTTGTTACATCCAGTGCTGTTAATGTGACGGAAACCGAAGTATTGACTGCAGACGGCCAAAAGATTGCATATGACTATCTTGTTATTGCCACCGGCCATGCAGACCCTGTACCCAAAATTAGGAGCGAAAGAATTCATCAATATAAAGAAGAAAATGAAAAGATAAAGTCTTCTCGTTCGATTCTGATTGTTGGAGGAGGTCCTACTGGTGTAGAACTTGCTGGAGAGATAGCTGTTGATTTTCCGGATAAGAAGGTTACACTGGTGCACAAAGGACCAAGGCTGTTGGAATTCATAGGCTCAAAAGCTGCTGATAAGACTCTAAGATGGTTGAAATCTAAGAATGTTGAGGTGAAGCTAAACCAAGCAGTCAACTTAAACAGTGACACAGATGGACATAACAAAATCTATCGAACTTCAGCAGGGGATACCATCGAAGCAGATTGTCATTTCTTGTGCACGGGAAAACCGTTTGGTTCGTCATGGCTTAAAGAATCTGTGTTGAAAAATGACTTGGATGTTCGGGGAATGATAAAGGTAGATGAAAACTTGAGAGTCAGGGGTCGAAACAACATTTTTGCAATTGGAGATATTACAAACATTCCGGAAATCAAGCAAGGGTTTTTGGCACAGAAGCAGGCAGAAGTGGTTGCGAAGAACTTGCGGATGATGATTGAGGGAGGTAAAGAATGTTGGAGGGAAACATACAAACCACATTCAGTATTGGCAATAGTTTCACTTGGGAGGTATGATGCAGTCGCACAATTGCCATTCCTAACGATAAGTGGAAGAATTCCTGGCTACATCAAGTCTGGAGATTTGTTTGTTGGTAGAACAAGAAAACAAATGGGGCTCAGCCCTCATATTGTAGAAACTTGA 1092 0.4112 MRKLNEERVVIVGGGIAGSIVAKSLQFHAHVILIDPKEYFEITWASLRSMVEPSFAERTLINHRQYFTKGDLVTSSAVNVTETEVLTADGQKIAYDYLVIATGHADPVPKIRSERIHQYKEENEKIKSSRSILIVGGGPTGVELAGEIAVDFPDKKVTLVHKGPRLLEFIGSKAADKTLRWLKSKNVEVKLNQAVNLNSDTDGHNKIYRTSAGDTIEADCHFLCTGKPFGSSWLKESVLKNDLDVRGMIKVDENLRVRGRNNIFAIGDITNIPEIKQGFLAQKQAEVVAKNLRMMIEGGKECWRETYKPHSVLAIVSLGRYDAVAQLPFLTISGRIPGYIKSGDLFVGRTRKQMGLSPHIVET* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1500 363 PANTHER APOPTOSIS-INDUCING FACTOR 1 7 360 - -
Mtr4g1500 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Mtr4g1500 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Mtr4g1500 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Mtr4g1500 363 PRINTS FAD-dependent pyridine nucleotide reductase signature 248 270 - -
Mtr4g1500 363 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 274 IPR023753 GO:0016491
Mtr4g1500 363 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 7 360 - -
Mtr4g1500 363 SUPERFAMILY FAD/NAD(P)-binding domain 6 292 IPR036188 -
Mtr4g1500 363 Gene3D - 4 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1500 Mtr-Chr4 26599714 26603529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1500 9 276 EF-hand Containing Proteins AT4G28220 23.313 1.55e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1500 K22745 - gmx:100813439 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1500 4 26599714 26603529 Mtr4g1500 4 26599714 26603529 ECH